Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g05217 ATGGGGAACTGTTGGAGTCTTCAATCAGGTTCTCCAGCCAATCATCCCAACTCCAGTACTGCCCCTCACCCCAACAATCAACCAGGGAGCGTTCAGTTTTCTGCTGGTCTAAGCAATACAAGATTAATACAGAATGGAAATTCTACTTCTCTTGGGCGTAGCAGCCACTCTGGAGGAACCAGCAGACTCTTTAGTAATAAGTACTCAACCGGCAATAATACTAGTTCATCCCTTTGGGGCTCAGAGAATAGCCAAGCCTCTCGAGTAAGAGATGAAGAGGAGTTTCCTTATGGGCAGATCTTGGATTCTGCAAACTTGAGAGTTTTTACTTTGGCAGAACTGAAGGCAGCCACTAAAAATTTCAGAGCTGACAGTCTGTTAGGAGAGGGGGGTTTTGGTAGAGTATACAAGGGTTTGATTAAGGAGAGAGAATCATCAAGAAGAGGTGAGGAATTGACTATTGCCATTAAGAAACTGAATTCTGAAGGCAGGCAAGGATTTGCTGAATGGCAGACAGAGGTGAATTTCTTGGGAAGGCTTTCTCATCCCAACCTTGTAAAGCTCTTTGGATTTGGGAGAGAGGATAGTGAGCTATTCCTGGTGTATGAATATATGCAGCGAGGCAGCTTGGATAACCACCTATTTGGAAGAGGTTCAATTGTTCGGCCACTTTCATGGGACACAAGGCTAAAGGTTATGATTGGAGCAGCTAGGGGACTAAATTTCCTTCATTCCTTGGAGAAGAAAATTATATACAGAGATTTTAAGCCCTCAAACATACTACTTGACAAGGCATATACAGCCAAGTTATCAGACTTTGGCTTAGCCAAATCTGTTCCTTCTGCTGATCAGACTCACGTATCAACACAGATTGTGGGAACACATGGCTATGCTGCTCCTGAGTACATTGCCACAGGTCACTTGTATGTGAAAAGTGATGTGTATGGATTTGGGATTGTTTTGTTGGAGATGCTGACTGGCAAGCGGATAAGTGAGATAAGGCGCCTTTGTCAGCAAAAGTCCCTACTTGATTGGCTCAAATCAAATCTATTGAATAGAGGGAAAATGAGAAGCAATATGGATGCAAGGTTGGAAGGTAGATATCCACCCAACTTGGCTTTACAAGTAGCTCAACTCACTCTCAAATGCATCCAATCTGAACCCAAAGTGAGGCCATCAATGCAAGAAGTTGTTGAAACATTGGAACATGTTGAAGCAGCAAATGAAAAACCAGCTGATAACAGAAAACGGGCTACTCAGTCCAGGGCAGTTCAACTACATGGTCGGCCAGATGGTGGTTAA 1302 0.4363 MGNCWSLQSGSPANHPNSSTAPHPNNQPGSVQFSAGLSNTRLIQNGNSTSLGRSSHSGGTSRLFSNKYSTGNNTSSSLWGSENSQASRVRDEEEFPYGQILDSANLRVFTLAELKAATKNFRADSLLGEGGFGRVYKGLIKERESSRRGEELTIAIKKLNSEGRQGFAEWQTEVNFLGRLSHPNLVKLFGFGREDSELFLVYEYMQRGSLDNHLFGRGSIVRPLSWDTRLKVMIGAARGLNFLHSLEKKIIYRDFKPSNILLDKAYTAKLSDFGLAKSVPSADQTHVSTQIVGTHGYAAPEYIATGHLYVKSDVYGFGIVLLEMLTGKRISEIRRLCQQKSLLDWLKSNLLNRGKMRSNMDARLEGRYPPNLALQVAQLTLKCIQSEPKVRPSMQEVVETLEHVEAANEKPADNRKRATQSRAVQLHGRPDGG* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g05217 433 ProSitePatterns Serine/Threonine protein kinases active-site signature. 250 262 IPR008271 GO:0004672|GO:0006468
Rops2g05217 433 FunFam Serine/threonine-protein kinase BIK1 87 204 - -
Rops2g05217 433 ProSitePatterns Protein kinases ATP-binding region signature. 127 158 IPR017441 GO:0005524
Rops2g05217 433 CDD STKc_IRAK 127 402 - -
Rops2g05217 433 SUPERFAMILY Protein kinase-like (PK-like) 99 401 IPR011009 -
Rops2g05217 433 MobiDBLite consensus disorder prediction 1 91 - -
Rops2g05217 433 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 205 415 - -
Rops2g05217 433 Gene3D Transferase(Phosphotransferase) domain 1 205 427 - -
Rops2g05217 433 ProSiteProfiles Protein kinase domain profile. 121 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g05217 433 Pfam Protein kinase domain 123 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g05217 433 PANTHER OS01G0588500 PROTEIN-RELATED 72 405 - -
Rops2g05217 433 MobiDBLite consensus disorder prediction 1 85 - -
Rops2g05217 433 MobiDBLite consensus disorder prediction 406 433 - -
Rops2g05217 433 Gene3D Phosphorylase Kinase; domain 1 81 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g05217 Rops-Chr2 93077760 93080468 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g05217 98 409 Receptor kinase-like Gene Family AT4G02010 43.810 1.14e-84 272
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Rops2g05217 Pkinase 1.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g05217 - - gmx:100813304 718.383