Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g05215 ATGATACCACATGTAGAACATAGAGATCTCGCGCGCGATTCGGGGAAGAAGCTGAAGCAGGCTAATTTGTTCCAGATTTGGGGCTTCGAAAGAAACGGTACCGTTAGTTCTGTTGAATCTGAACCCAATCAAAGTGGTTATCGTGATGAAGGAGGTGAGGGCAGTGCTTTTCAGAAAAGGAAGATTGGGAAACCTGGAAATTGGGGTTCGATTTTGCGTGACACTGGGAAAGCTTTTGAGAATCCAAAATCTTCTCGCAAGAGAAAAGATACCCCTGGAGAAAATAGAGTCACACGTGCCTGCCCCTTTTATAAGAAAATCCCAGGGACAACCTTCACTGTTGATGCTTTTCGTTATGGGTGTGTTGAAGGGTGCTCAGCGTATTTTCTTAGTCATTTCCATTGCGATCACTATGGTGGCCTTAGTAAGAAATGGTCACATGGCCCTATTTATTGCTCTCCTCTCACGGGACGGCTGGTTCAAATGTGTCTCTCGGTAAATCCTTTGTACATCTACCCTTTGGAATTTAACACTAAACATGTGATTGATGGCATCAAAGTGACTTTGTTAGAAGCCAATCATTGCCCTGGTGCAGCTTTGATTCACTTCGACCTCCCAAATGGGAAATCTTATTTGCACACTGGGGACTTTAGAGCTTGTAAACAAATGCGGACTTATGATCTTCTAGTAAATAAACGTGTGAATGTACTTTATTTGGATACCACATATTGCAACCCAAAATACCAGTTCCCTTCCAAGGAAGATGTACTTAATTATGTTGTCAAAATTACAAAGAACCACCTCAAAATGCATCCCAGAACTTTAGTGGTTGTTGGGGCATATAGTATTGGCAAAGAATGTGTATATCTAACAATTTCTAAGGCACTCGGGGTAAAAATTTATGCTAATGCTTCAAGAAGACGGATTTTGCTAGCTTTTGGAATACTTGAAGACCTACAAGGAACAATTCTCAGCAATATTAGCATTCCGTCCAACAGAAACAACTCAATGGGGAACTGTTGGAGTCTTCAATCAGGTTCTCCAGGCAACCATCTCAACTCCAATACTGTCCCTGACCCCAATAGTCAACCAGGGAGCGTTCAGTTTTCTGCTGGTCTAAGCAATACAAGATTAATACAGAATGGAAATTCTACTTCTCTTGGGCGTAGCAGCCATTCTGGAGGAACCAGCAGCCTCTTTAGTAATAAGTACTCAACCGGAAATAACACTAGTTCATCCCTTTGGGGCTCAGAGAATAGCCAAGCCTCTCGAGTAAGAGATGAAGAGGAGGAGTTTCCTTATGGACAGATCTTGGATGCTGCAAACTTGAGAGTTTTTATTTTGGCAGAACTGAAGGCAGCCACTAAAAATTTCAGAGCTGACCGTCTGTTAGGAGAGGGGGGTTTTGGTAAAGTATACAAGGGTTTGATTAAGGAGAGAGAATCATCAAGAAGAGGTGAGGAATTGACTATTGCCATCAAGAAACTGAATTCTGAAAGCTGGCAAGGATTTGCTGAATGGCAGACAGAGGTGGATTTCTTAGGGAGGCTTTCTCATCCCAACCTTATAAAGTTGTTGGGCATCGGGCGAGAGGATAGTGAGCTATTACTGGTGTATGAATTTATGCAACGGGGCAGTTTGGATAACCACCTATTTAGAAGTGGTCGGCCACTTTCGTGGGATACAAGGCTAAATGTTATGGTTGGAGTAGCCAAGGCACTAGCTTTCCTACACTCATTAGAGAAGAAAATTATATACAGAGATGTTAAGCCTTCAAATATATTACTTGACAAGACATATTCAGCCAAGTTATCAGACTTCGGATTAGCCAAATATGGTCCTTCTGCTGATGAGACTCACGTGTCAACACTGGTTATGGGAACACACGGCCGTGCAGCTCCTGAGTACATTGCCACAGGTCACTTGTATGTAAAATCTGATGTGTATGGATTCGGGATTGTTTTGTTGGAGATGCTGACTGGCAAGCCGATAACTGATATGATGCTTGATAAGCAAAAGTCTTTACAGGATTTGCTCAAACAAAATCTATTAAATAGAAGGAAAATGAGAAGCACAATGGATGCAAAGTTGGAAGGCAAGTATCCACTCAACTTAGCTTTAAAAGTAGCTCAACTTACTCTCAAATGCATCCAAGAAAACCCCAAAGTAAGGCCATCAATGAGAGAAGTTGTTGTAACATTGGAACAGATCGAAGCAGCCAATGAGAAACCAGCTGATAACAGAAACCATGCAACTCATTCTCGGGCTCTTCAACCACATGGCCAACCAGAAGGTGGTTAA 2301 0.422 MIPHVEHRDLARDSGKKLKQANLFQIWGFERNGTVSSVESEPNQSGYRDEGGEGSAFQKRKIGKPGNWGSILRDTGKAFENPKSSRKRKDTPGENRVTRACPFYKKIPGTTFTVDAFRYGCVEGCSAYFLSHFHCDHYGGLSKKWSHGPIYCSPLTGRLVQMCLSVNPLYIYPLEFNTKHVIDGIKVTLLEANHCPGAALIHFDLPNGKSYLHTGDFRACKQMRTYDLLVNKRVNVLYLDTTYCNPKYQFPSKEDVLNYVVKITKNHLKMHPRTLVVVGAYSIGKECVYLTISKALGVKIYANASRRRILLAFGILEDLQGTILSNISIPSNRNNSMGNCWSLQSGSPGNHLNSNTVPDPNSQPGSVQFSAGLSNTRLIQNGNSTSLGRSSHSGGTSSLFSNKYSTGNNTSSSLWGSENSQASRVRDEEEEFPYGQILDAANLRVFILAELKAATKNFRADRLLGEGGFGKVYKGLIKERESSRRGEELTIAIKKLNSESWQGFAEWQTEVDFLGRLSHPNLIKLLGIGREDSELLLVYEFMQRGSLDNHLFRSGRPLSWDTRLNVMVGVAKALAFLHSLEKKIIYRDVKPSNILLDKTYSAKLSDFGLAKYGPSADETHVSTLVMGTHGRAAPEYIATGHLYVKSDVYGFGIVLLEMLTGKPITDMMLDKQKSLQDLLKQNLLNRRKMRSTMDAKLEGKYPLNLALKVAQLTLKCIQENPKVRPSMREVVVTLEQIEAANEKPADNRNHATHSRALQPHGQPEGG* 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g05215 766 Gene3D - 107 248 IPR036866 -
Rops2g05215 766 Gene3D - 249 315 - -
Rops2g05215 766 MobiDBLite consensus disorder prediction 79 95 - -
Rops2g05215 766 MobiDBLite consensus disorder prediction 382 421 - -
Rops2g05215 766 SMART serkin_6 458 737 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g05215 766 SUPERFAMILY Protein kinase-like (PK-like) 443 742 IPR011009 -
Rops2g05215 766 FunFam DNA cross-link repair 1A 107 270 - -
Rops2g05215 766 Gene3D Transferase(Phosphotransferase) domain 1 542 758 - -
Rops2g05215 766 MobiDBLite consensus disorder prediction 340 368 - -
Rops2g05215 766 ProSiteProfiles Protein kinase domain profile. 458 737 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g05215 766 FunFam Serine/threonine-protein kinase BIK1 425 541 - -
Rops2g05215 766 CDD SNM1A-1C-like_MBL-fold 89 246 - -
Rops2g05215 766 PANTHER OS01G0588500 PROTEIN-RELATED 409 738 - -
Rops2g05215 766 FunFam PTI1-like tyrosine-protein kinase 3 542 748 - -
Rops2g05215 766 ProSitePatterns Serine/Threonine protein kinases active-site signature. 584 596 IPR008271 GO:0004672|GO:0006468
Rops2g05215 766 ProSitePatterns Protein kinases ATP-binding region signature. 464 495 IPR017441 GO:0005524
Rops2g05215 766 MobiDBLite consensus disorder prediction 741 766 - -
Rops2g05215 766 Gene3D Phosphorylase Kinase; domain 1 442 541 - -
Rops2g05215 766 SUPERFAMILY Metallo-hydrolase/oxidoreductase 123 299 IPR036866 -
Rops2g05215 766 MobiDBLite consensus disorder prediction 382 428 - -
Rops2g05215 766 Pfam Protein kinase domain 459 731 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g05215 766 MobiDBLite consensus disorder prediction 35 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g05215 Rops-Chr2 93043583 93055790 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g05215 444 734 Glycoside Hydrolase AT3G07070 43.813 3.36e-69 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Rops2g05215 Pkinase 5.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g05215 - - gmx:100813304 611.683