Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g05183 ATGGAGCCTCGTGTTGGGAATAAGTTTCGACTGGGTCGGAAGATCGGTAGCGGCTCCTTTGGGGAGATCTATCTAGGTACAAATATTCAAACTAACGAAGAGGTTGCAATTAAGCTCGAAAATGTCAAGACAAAGCATCCTCAGTTGCTGTATGAATCCAAGTTGTACAGAATTCTCCAGGGAGGAACTGGAATTCCAAATGTTAGATGGTTTGGAGTGGAGGGAGATTACAATGTTTTAGTGATGGATCTGCTTGGACCGAGTCTTGAAGATCTATTTAACTTTTGTAGTAGAAAGCTATCACTGAAGACAGTTCTCATGCTTGCTGATCAAATGATCAACCGTGTTGAGTTTATTCATTCTAAATCATTTCTACATCGCGATATCAAACCGGATAATTTTCTAATGGGATTAGGAAGGCGTGCGAACCAGGTTTATGCTATTGATTTTGGTTTGGCTAAGAAATACAGAGATAGTTCAACTCATCAACACATTCCTTACAGGGAAAATAAGAATTTGACTGGAACTGCAAGATATGCTAGCATGAATACTCACCTTGGCATTGAGCAAAGCCGAAGAGATGATTTAGAGTCTCTTGGTTATGTTTTGATGTACTTCCTGAGAGGAAGTCTTCCTTGGCAGGGACTTAAAGCAGGAACCAAGAAACAGAAGTATGAGAAAATCAGTGAAAAAAAGGTTTCTACTTCGATTGAAGCCTTGTGTCGTGGTTATCCAACAGAATTTGCATCATACTTTCATTACTGTCGCTCTCTGAGGTTTGATGATAAGCCGGATTATGCTTACCTCAAAAGGATATTTCGAGACTTGTTTATTCGTGAAGGATTCCAGTTCGATTATGTGTTTGACTGGACAATCTTGAAGTATCAGCAATCACAGCTTGCCACACCTCCAACACGGGCCATTGGTCCTAGCGCTGGAACAAGTTCTGGATTGCCTCCGGCTATAACAAGTGCTGATAGACATACAGGAGGGGAAGAAGGGAGACCTCCTGGTTTGGTTTCGGTGGATTCCTCAAGGCGCAGAATGTCAGGGCCCATTTTGAATACCTTATCAAGTGCCAATGTCTTGGGCCAGTCAAGTGGATCAAGGCGAGCTGCTGTTTCTAGTAGCCGTGATGCATTTGTTGGTGCTGAGTCAGATGTTCGTACTCGCACTGCTGAGGCTAGCCCTGTAGCAGCACACAGAATTTTAAGTGGGCAAAGAAGTTCACCAATTGGATCTTCTGATCCCAAGAGAGTAGTATCATCTGGGAGAAATGCTTCTCATGTCAAAAATTATGACACTGCACTTAGGGGCATGGAGGGTTTGCAGTTGGAGAATGATGAGAGGACCCATTATTAA 1362 0.428 MEPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFIHSKSFLHRDIKPDNFLMGLGRRANQVYAIDFGLAKKYRDSSTHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRIFRDLFIREGFQFDYVFDWTILKYQQSQLATPPTRAIGPSAGTSSGLPPAITSADRHTGGEEGRPPGLVSVDSSRRRMSGPILNTLSSANVLGQSSGSRRAAVSSSRDAFVGAESDVRTRTAEASPVAAHRILSGQRSSPIGSSDPKRVVSSGRNASHVKNYDTALRGMEGLQLENDERTHY* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g05183 453 CDD STKc_CK1_delta_epsilon 8 282 - -
Rops2g05183 453 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g05183 453 PANTHER CASEIN KINASE-RELATED 9 399 - -
Rops2g05183 453 MobiDBLite consensus disorder prediction 303 322 - -
Rops2g05183 453 Gene3D Transferase(Phosphotransferase) domain 1 1 309 - -
Rops2g05183 453 FunFam Casein kinase I isoform delta-like 1 308 - -
Rops2g05183 453 MobiDBLite consensus disorder prediction 407 430 - -
Rops2g05183 453 FunFam Putative Casein kinase I 1 85 - -
Rops2g05183 453 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Rops2g05183 453 SMART serkin_6 9 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g05183 453 MobiDBLite consensus disorder prediction 303 345 - -
Rops2g05183 453 Pfam Protein kinase domain 10 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g05183 453 SUPERFAMILY Protein kinase-like (PK-like) 5 290 IPR011009 -
Rops2g05183 453 MobiDBLite consensus disorder prediction 402 435 - -
Rops2g05183 453 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g05183 Rops-Chr2 92565615 92571366 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g05183 7 223 EF-hand Containing Proteins AT2G17890 26.667 1.20e-13 71.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Rops2g05183 Pkinase 9.9e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g05183 K02218 - gmx:100811567 871.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g05183 2 92565615 92571366 Rops2g05183 2 92565615 92571366 ECH