Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g05175 ATGTCCACACTGAGATCGGTGGCTGTTGCCGTCACTGGCGGCTCCGGCGCCGCCAAGGGTAGCCGGCGAGCCGTCCAGTGGGCGGTGGACAATCTCGTCCCTCAAGCTGATAGGTTCATCTTAGTTCATGCCATGCCCAGAATCACTTCAGTTGCAACCCCAAATGGGGAGTATATTCCGATTTCGGAAGCAGATGCCGATGCCTTTGCAGCTTATGTGCAGGATGTGAAACAAAAGTCTGAACAAATCTTTGTTCCATTCAAGAAACTCTGCAAAGAATCAAACATGATGGAAACCTTGCTGCTAGAAGATGACAATCCTGCAAATGCACTTCTTAGCTTTATCTCTGAGTCTGGGGTCCAAATTTTAGTGCTGGGTTCCGACTCCTCGAATTTTATTACCAGGAAGCTAAAAGGACCTGGGATACCAACTACCATTCTAAGATGTGCTCCTGACGGCTGTGATGTATATGTTGTATCTAGAGATAGAATTATATCAAAGTTAGCTGATTCTTCATCTTCACATTCTCATGAGACTAGCCCAAGGTACTTCATGTCTGCTCAGGTAAATAAAGCAGACAGTGGTGCTGGCATTAATGGAGAAATGTCCCGAATTAATTCATCCTCAACAGAACCTAAAATTTTAAAAAATTTCAGATTTTTATCAATATCAGAGCGTAGTTACATTGGCCTGCAAACATTTAGTCGAAGGGATTCTTTTGAAAATTCTACCAAAGATGAAGAAGAAAATCCAGAAAACTGTGGAGAAGATGTTGAAACTATTAGCTTCCACTCATTTGATTCCATTGCTACTGCACAACGTGAACAGTTAGTAATGCAAGAAGAAGTGGAACGGCTGCAGCTAGAGTTGCAGAATACTATTGCCATGTATAATCAGGTTTGTGAAGAACTGGTTCGATCTCAGAGCAAGGCCCGTTTACTTTCTTCTGAATCTCTTGAAGAAGCTAAAAGAATAAATGCTTCCTTGAAAAGAGAGGAGACTTTGAGAAAGATTGCTGCTGAAGAGAAAGCAAAGTATTTAAAAGTCACAAAGGAACTTGAGGAGGCGAAAAATATGTTTGCCAAAGAGACATATGAAAGACAGATAGCTGAACTTAATGTCGCTAAAGAATCCATAGAAAAACAAAGAATTGTTAATACATTGCTCTCAAAGGACAGGAGATACAGAAAGTACACGATGGATGAAATCAAGATAGCAACAAACTTCTTCTCTGAGGACTTGATAATTGGTGAAGGAGGGTATGGTAAAGTTTACAAGTGCAATCTTGATCACACACCAGTAGCTGTAAAGGTTCTGCATCAGGATGCAATCAACAAGAAAGAGGAGTTTCTTAAAGAGGTTGAGATTCTTAGTCAGCTACACCATCCAAATATGGTTTTATTACTTGGAGCCTGTCCTGAGAATGGTTGCCTTGTTTATGAATACCTGGAAAATGGAAGTCTAGAAGACTATCTTCTAAAAAAAAATGGAAAACCACCACTTCCTTGGTATTTTCGATTTCGAATAGTTTTTGAAATGGCATGTGGGCTCTCATTCTTGCATAATTCAAAGCCAGAGCCTATTGTTCATAGAGATATAAAACCTGGCAATATCTTGTTAGACAGAAATTATGTGAGCAAAATTTCAGATGTGGGACTGGCTAAACTCCTTTCAGATGTCGTGCCTGACAATATCACAGAGTACCGAGAATCAATACTTGCAGGTACTCTGCACTACATGGACCCAGAATATCAGAGAACTGGCACCGTCCGACCAAAATCAGATGTATATGCTTTTGGAGTTATAACTCTCCAATTGATAACTGCTCGCCATGCACGTAGACTCATTTTGACTGTTGAAGATGCAATTACTAATGGCTCCTTCAGTAATATTTTAGATAAATCAGCTGGAGATTGGCCACTGGATGAAACAATGGAATTGGCTCAAATTGCTCTTAAATGTGTTGCACTTAGATGCAGAGATAGACCAGAACTTGATACTGAAGTTCTTCCAGTGCTCAAAAGACTTTCTGATGTGGCAAATGCTAGTGCAAGGATAGGAAGAAATAGTATATGCACGCCAAGCCAGTATTATTGTCCAATTCTTCAGGAAATCATGGAGGAGCCATATATTGCTGCGGATGGTTTCACTTATGAGTACAGAGCAATCAAGGCATGGCTCAGCAGACACAATGTGTCGCCAGTGACAAAGGTTAAAGTCCAGCATTCTGAGTTGACTCCAAACCATACTTTACGTTCTGCCATTCAAGAGTGGAAATCAGGAGTGACCTTTTTCGATTAG 2301 0.4072 MSTLRSVAVAVTGGSGAAKGSRRAVQWAVDNLVPQADRFILVHAMPRITSVATPNGEYIPISEADADAFAAYVQDVKQKSEQIFVPFKKLCKESNMMETLLLEDDNPANALLSFISESGVQILVLGSDSSNFITRKLKGPGIPTTILRCAPDGCDVYVVSRDRIISKLADSSSSHSHETSPRYFMSAQVNKADSGAGINGEMSRINSSSTEPKILKNFRFLSISERSYIGLQTFSRRDSFENSTKDEEENPENCGEDVETISFHSFDSIATAQREQLVMQEEVERLQLELQNTIAMYNQVCEELVRSQSKARLLSSESLEEAKRINASLKREETLRKIAAEEKAKYLKVTKELEEAKNMFAKETYERQIAELNVAKESIEKQRIVNTLLSKDRRYRKYTMDEIKIATNFFSEDLIIGEGGYGKVYKCNLDHTPVAVKVLHQDAINKKEEFLKEVEILSQLHHPNMVLLLGACPENGCLVYEYLENGSLEDYLLKKNGKPPLPWYFRFRIVFEMACGLSFLHNSKPEPIVHRDIKPGNILLDRNYVSKISDVGLAKLLSDVVPDNITEYRESILAGTLHYMDPEYQRTGTVRPKSDVYAFGVITLQLITARHARRLILTVEDAITNGSFSNILDKSAGDWPLDETMELAQIALKCVALRCRDRPELDTEVLPVLKRLSDVANASARIGRNSICTPSQYYCPILQEIMEEPYIAADGFTYEYRAIKAWLSRHNVSPVTKVKVQHSELTPNHTLRSAIQEWKSGVTFFD* 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g05175 766 ProSitePatterns Serine/Threonine protein kinases active-site signature. 528 540 IPR008271 GO:0004672|GO:0006468
Rops2g05175 766 Coils Coil 362 382 - -
Rops2g05175 766 Gene3D Phosphorylase Kinase; domain 1 389 482 - -
Rops2g05175 766 PANTHER OS02G0152300 PROTEIN 7 757 - -
Rops2g05175 766 ProSiteProfiles Protein kinase domain profile. 410 698 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g05175 766 ProSitePatterns Protein kinases ATP-binding region signature. 416 437 IPR017441 GO:0005524
Rops2g05175 766 Coils Coil 339 359 - -
Rops2g05175 766 SUPERFAMILY Protein kinase-like (PK-like) 393 665 IPR011009 -
Rops2g05175 766 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 7 162 - -
Rops2g05175 766 Gene3D Transferase(Phosphotransferase) domain 1 483 691 - -
Rops2g05175 766 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 692 762 IPR013083 -
Rops2g05175 766 Coils Coil 269 303 - -
Rops2g05175 766 SMART Ubox_2 696 758 IPR003613 GO:0004842|GO:0016567
Rops2g05175 766 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 382 482 - -
Rops2g05175 766 SUPERFAMILY RING/U-box 693 759 - -
Rops2g05175 766 ProSiteProfiles U-box domain profile. 692 765 IPR003613 GO:0004842|GO:0016567
Rops2g05175 766 CDD STK_N 6 161 - -
Rops2g05175 766 Gene3D HUPs 4 162 IPR014729 -
Rops2g05175 766 CDD RING-Ubox_WDSUB1-like 694 748 - -
Rops2g05175 766 SMART serkin_6 410 673 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g05175 766 Pfam U-box domain 694 759 IPR003613 GO:0004842|GO:0016567
Rops2g05175 766 Pfam Protein tyrosine and serine/threonine kinase 415 666 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g05175 Rops-Chr2 92486154 92491800 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g05175 6 760 Plant U-box Gene Family AT5G57035 53.915 0.0 823
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Rops2g05175 PK_Tyr_Ser-Thr 1.6e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g05175 - - gmx:100805896 1266.91