Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g05171 ATGCAGGAAATATCTTCAGGTGTTGCAGTACCATTTACACTTGGAAACTTGATTCAAAAGGAGTCTGCTGTAAAGACCCACTTGGAGATAACTGGGCTAAAGCTTATGGCAAATACAGCAGCAACTTTAATATTAAATCCTGCAGTTGAGGGTTGTCAATCATATTCTGTTGGGAGTGAAAACCATGCTGATGTTAGTCTACAACACCAAATAACTGTGTCTGCAGAGGTAAAGGAGAATTCAGTTGGAGATCCCCTTGTCTCAGAAATGGTTACTGAATGTGAGAGTGATTGGTTTTTGACTGAGAGCCATAACCAGGCAAGAAAGGAAGATGAGTTATTGTTGTCTGTGGATTTTCAGTGTCTACATAATTCAAGCTCTCAGTCTGTGGCTAATGAAAAAAGTGGTCCTTGTGGGGAGGAAGCTGCATCAAATCGAAGTGGATCAGATGAATCTAATCCAAAATCATCTCCTGTGCTTCTTGATCAGTTGCCAAAGGAGAATAAAACAAGGAGCACAAGCAACCAGAATGCTTTGGAATTGAGTAGTGGCCCTCTCTGGGGTGTCTCATCAATTTGTGGACAGAGACAGGAGATGGAAGATGCTATTGCTGTTAAGCCTCAACTTTTTCAAGTCCCTTCACAGATGCTAACGGATGGCCATGTGAATGAAAACACAAAAAACTCACCAGCCCACTTTTTTGGTGTCTATGATGGACATGGGGGCTTTCAGGTTGCTAATCACTGCCGGGAACGTCTTCATTCAGTGTTAATTGAGGAGATAGAAGCTGCACAATCAAGTTTGGCTGAAACAAATGGGAGAAACGATTGGCAGGACCATTGGAAGAAAGCATTCTCCAATTGTTTTCAGAAAGTAGATGATGAGGTTGGAGGAATTGGTGCAGGTAATAGTGGAAATAACAGTAGTGGATCTGAGTCTAATATGGAACCTCTTGCTCCTGAGACTGCTGGCTCCACTGCAGTGGTTGCCATTTTAAGTCAAACCCACATAATAGTTGCAAATTGTGGAGATTCAAGAGCTGTCTTGTATCGTGGAAAAGAAGCCCTGCCATTGTCTGCTGACCACAAACCAAATAGAGAGGATGAGCGGGCAAGGATAGAAGCTGCAGGAGGAAGAGTCATACATTGGAAAGGATACCGAGTTCTTGGTGTCTTGGCAATGTCAAGGTCCATAGGTGATAGATACTTGAAACCATGGATAATTCCAGAACCAGAAGTCAATATTATGCGTCGAGAGAAAAACGATGAGTGCCTCATTCTAGCAAGTGATGGTTTATGGGATGTGATGACAAATGAAGAAGTCTGCGAAGTTGCAAGGAAGAGAATCCTTATTTGGCACAAGAAGTATGGCAACAACGAATCAACAAAACAAGGTGAAGGAGGAGTTGATCTTGCAGCTCAGTCAGCTGCAGAGTATCTATCAAAACTTGCCCTCCATAGGGGAAGCGATGATAACATCTCTGTAATTGTTATTGACTTAAAGACTCAAAGAAAATTTAAGAGAAAAGCATAA 1533 0.4214 MQEISSGVAVPFTLGNLIQKESAVKTHLEITGLKLMANTAATLILNPAVEGCQSYSVGSENHADVSLQHQITVSAEVKENSVGDPLVSEMVTECESDWFLTESHNQARKEDELLLSVDFQCLHNSSSQSVANEKSGPCGEEAASNRSGSDESNPKSSPVLLDQLPKENKTRSTSNQNALELSSGPLWGVSSICGQRQEMEDAIAVKPQLFQVPSQMLTDGHVNENTKNSPAHFFGVYDGHGGFQVANHCRERLHSVLIEEIEAAQSSLAETNGRNDWQDHWKKAFSNCFQKVDDEVGGIGAGNSGNNSSGSESNMEPLAPETAGSTAVVAILSQTHIIVANCGDSRAVLYRGKEALPLSADHKPNREDERARIEAAGGRVIHWKGYRVLGVLAMSRSIGDRYLKPWIIPEPEVNIMRREKNDECLILASDGLWDVMTNEEVCEVARKRILIWHKKYGNNESTKQGEGGVDLAAQSAAEYLSKLALHRGSDDNISVIVIDLKTQRKFKRKA* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g05171 510 SUPERFAMILY PP2C-like 185 501 IPR036457 -
Rops2g05171 510 MobiDBLite consensus disorder prediction 128 180 - -
Rops2g05171 510 MobiDBLite consensus disorder prediction 166 180 - -
Rops2g05171 510 ProSiteProfiles PPM-type phosphatase domain profile. 186 500 IPR001932 -
Rops2g05171 510 MobiDBLite consensus disorder prediction 299 320 - -
Rops2g05171 510 FunFam Protein phosphatase 2C 16 174 510 - -
Rops2g05171 510 SMART PP2C_4 176 498 IPR001932 -
Rops2g05171 510 MobiDBLite consensus disorder prediction 145 159 - -
Rops2g05171 510 PANTHER PROTEIN PHOSPHATASE 157 500 IPR015655 GO:0004722|GO:0006470
Rops2g05171 510 MobiDBLite consensus disorder prediction 301 320 - -
Rops2g05171 510 Gene3D - 174 510 IPR036457 -
Rops2g05171 510 ProSitePatterns PPM-type phosphatase domain signature. 233 241 IPR000222 GO:0043169
Rops2g05171 510 CDD PP2Cc 188 500 IPR001932 -
Rops2g05171 510 Pfam Protein phosphatase 2C 189 493 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g05171 Rops-Chr2 92441359 92444862 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g05171 1 510 PP2C-type Phosphatase Gene Family AT1G17550 44.530 9.42e-138 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g05171 K14497 - gmx:100789207 731.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g05171 2 92441359 92444862 Rops2g05171 2 92441359 92444862 ECH
Rops2g05171 2 92441359 92444862 Rops11g01804 11 29020935 29023210 PCT