Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g05165 ATGAACTTGAAGAAGGGGAGATTTGACAATAGGCTTTCAAACTCAAAGGAAGTTTTGAACTGAATTGTCGTTCTAAATTCAAAGTTACCGTTCTGTACTGTCCGATCTGACTCACCGAGTCCCCCCTTCTTCCTCGACTCGGATGAGTTAGTCCTGAAAGATCGCTCCGCATTAATCGCCATGTCTGCACCAGTGAACATTATTGTTGGTTCTCATGTTTGGGTTGAAGATCCAGCACAAGCATGGATTGGTGGAGAAGTAATTAAAATCAATGGTGAAGAAGTCCATGTTCGCACTGGAGATGGGAAAACAGTTGTCAAAAATATCTCAAAGGTTTTTCCCAAGGATAATGAAGCCCCTCCTGGAGGTGTAGATGACATGACAAAATTGTCATACTTGCATGAACCAGGAGTTCTGCACAACTTGGCAACTAGATATGAACTCAATGAAATCTATACGTATACTGGAAATATCCTGATTGCGATAAACCCATTTCAAAGGTTACCGCATCTCTATGATACTCACATGATGGAACAATACAAAGGAGCTGCATTTGGAGAGTTGAGTCCCCATGTTTTTGCGGTTGCAGATGTTGCGTACAGGGCAATGATCAATGAGGGAAAAAGCAACTCAATCCTGGTTAGCGGGGAGAGTGGGGCTGGTAAGACAGAGACAACAAAAATGCTTATGCGATATCTTGCATACCTTGGGGGCCGATCTGGAGTAGAAGGGCGGACAGTTGAACAACAAGTTCTAGAATCTAATCCAGTTCTTGAAGCATTTGGCAATGCCAAAACAGTTAGAAACAATAACTCAAGTCGTTTTGGTAAATTTGTTGAGATACAATTTGACAACAAGGGAAGGATCTCCGGGGCAGCTATACGGACTTATTTGCTTGAGAGGTCCCGTGTTTGTCAAATTTCAAATCCTGAAAGAAATTACCATTGCTTTTACCTTCTTTGTGCAGCACCAGCTGAGGAAAAAGAGAAGTATAAGCTGGGAAGTCCTAGCTCTTTCCATTACTTAAATCAATCCAACTGCTATGTGCTGGATGGAGTGGATGATGCAGAAGAATATCTTGCAACTCGAAGGGCAATGGATGTTGTTGGAATCAGTGAGGAGGAGCAGGATGCAATTTTTAGGGTTATTGCAGCAATTTTGCACCTTGGAAATATTGAATTTGCGAAAGGAGAGGAGATTGACTCTTCCGTTCTCAAGGATGAGAAGTCTAGGTTCCATCTTAATATGACTGCTGAACTTCTTAAGTGTGATGCTAAGAGCTTGGAAGATGCACTGATCAAGCGTGTGATGATAACGCCTGAGGAGGTTATTACAAGAACCCTTGATCCTGATGCAGCTCTTAGTAGCAGGGATGCGTTAGCTAAAACTAGTTATTCACGATTGTTTGATTGGCTTGTGGAGAAGATTAACAATTCAATTGGGCAAGATCCAAATTCAAAATCTATCATTGGAGTTCTTGATATCTATGGGTTCGAAAGTTTTAAGTTCAATAGTTTTGAGCAGTTCTGTATTAATTTTACAAATGAGAAGCTACAACAACATTTTAACCAGCATGTCTTTAAAATGGAACAAGAAGAATACACCAAAGAAGAGATCGATTGGAGTTACATAGAGTTTGTTGACAACCAAGATGTTTTGGATCTAATTGAGAAGAAACCTGGAGGAATAATTGCACTTCTTGATGAAGCCTGTATGTTTCCTAAGTCTACACATGAAACATTTTCTCAGAAGTTGTACCAGACATTCAAAAACAACAAGCGCTTCATCAAACCTAAACTTTCTCGGACTAGCTTTACCATATCTCATTATGCAGGGGAGGTGACATATCTAGCTGATATGTTTCTTGACAAAAACAAGGATTATGTGGTGGCAGAACATCAGGATCTGCTGACAGCCTCAAAATGCTCATTTGTGGCAGGTCTATTCCCCCCTTCTCAAGAGGAGTCTTCAAAATCATCGAAGTTCTCTTCAATAGGATCTCGCTTTAAGTTACAACTTCAATCTTTGATGGAGACCCTAAGTTCAACAGAACCTCACTATATCAGATGTGTGAAGCCAAATAATGTTCTCAGGCCTGCTATTTTTGAAAATCTCAATATCATCCAACAATTACGCTGTGGTGGTGTTCTTGAGGCAATTAGAATCAGCTGTGCTGGATATCCCACCAGACGGACCTTTTATGAATTTCTTAACCGATTTGGTGTTCTTGCCCCTGAAGTTCTGGATGGAAACTGTGATGACAAGGTTGCATGCCAAATGATCCTGGATAAAATGGGCATGAAAGGATATCAGATAGGCAAGGCAAAGGTTTTCCTGAGAGCTGGCCAGATGGCTGAGTTGGATGCGAGAAGAGCTGAGGTTCTTGGAAATGCAGCTAGAATCATCCAGAGGCAAATACGTACCCATATTGCACGCAAGGAATTCATCGAATTGCGTCAAGCTGCAATTAGTTTGCAGTCTAATTTGCGAGGAATATTGGCTCGGAAGCTCTATGAGCAGTTGCGACGTGAAGCAGCAGCTTTGAAAATAGAAAAGAACTTCAAAGGATACATTGCAAGGAAATCTTACTTGAAAGAACGATCGTCTGCAATTATATTACAGACAGGTTTAAGGGCAATGAAGGCTCGTGATGAATTTAGATTTAGAAAACAAACGAAGGCTGCAATTCATGTCCAGGCTCATATGCGTCGGCTAATTGCATATTCATATTATAAAAGATTGCAAAAGGCTGCAGTTGTTACTCAATGTGGTTGGAGGAGAAGGGTTGCTAGAAGGGAACTTAGAATGCTTAAAATGGCTGCACGAGAAACAGGGGCTCTTAAAGAAGCAAAAGACAAACTGGAAAAGCGTGTTGAAGAACTGACATGGCGTTTGCAAATTGAGAAGCGTTTGAGAACTGATTTGGAAGAGGAAAAGGCACAAGAAATTGCTAAGTTACAGGATGCATTACATGCAATGCAAATACAAGTAGAAGAATCAAATGCCAGGGTCGTTAAAGAGCGTGAGGCGGCACAGAAAGCCATTAAAGAAGCTCCTCCAGTTATTAAGGAGACTCCTGTTATAATTCAAGATACTGAAAAGCTTAATTCTTTATTGGCTGAAGTTAACAGTTTGAAGGAATCACTGCTATCGGAAAGAGAAGCTAAAGAAGAGGCCAGAAAAGCTCAGGTGGAGGCTGAAGCTAGAAAAATGGAGCTGGCTAAAAAAGTTGAAGATTCTGACCGCAAAGTGGATCAACTCCAAGAATTGGTTCAGAGATTGGAAGAAAAAATCTCCAATGCAGAGTCAGAAAATCAAGTTCTTCGCCAGCAAGCACTGGCTGTATCACCAACTGGAAAAACTCTTTCTGCAAGACCAAGGACAGTGATTATTCAGAGGACACCAGAAAATGGGAATGCTCTAAATGGTGAAGCAAAAATTGGATCAGATATGACTCTTGCTGTATCCAATTTACGTGAGCCTGAATCTGAGGGAAAACCACAAAAATCTCTCAATGAGAAGCAGCAAGAAAACCAGGACTTGTTGATCAAGTGCATAACACAAGATTTGGGATTTTCTGGGGGCAAACCTGTTGCTGCATGTGTCATATATAAATGCCTTCTTCACTGGAGGTCATTTGAAGTTGAAAGAACGAGTGTCTTTGACCGTATCATTCAAACAATAGCTTCAGCTGTTGAGGCCCAGGATAATACTGATGTATTAGCCTATTGGTTGTCTAATACATCTACTTTGTTGTTGCTACTCCAACGCACTCTTAAAGCAAGTGGAGCTGCTAGCTTAACACCACAACGACGGAGAACAGCATCGTCTTCTCTGTTTGGAAGAATGTCTCAAGGGCTAAGGGCATCTCCTCAAAGTGCTGGATTATCATTTATAAATGGTCGAGGTCTTAGTAGACTGGATGATTTACGACAAGTAGAAGCAAAATATCCGGCTCTTCTGTTTAAGCAACAGCTTACTGCCTTCCTTGAAAAAATATATGGAATGATACGAGACAACCTAAAAAAGGAGATATCTCCATTACTTGGACTGTGTATACAGGCTCCAAGGACCTCACGTCAAGGTTTAGTAAAAGGACGCTCACATGCTAATGCGGTTGCTCAGCAAGCTTTAATTGCTCACTGGCAAAGTATTGTGAACAGCTTAAACAATTATCTGAAGATAATGAAAGCAAACTATGCGCCTCCTTTCTTGGTCCGTAAAGTGTTCACTCAAATATTCTCATTCGTCAATGTCCAATTATTCAACAGTCTTCTGCTGCGTCGCGAGTGCTGTTCGTTCAGCAATGGTGAGTATGTGAAGACCGGTTTGGCTGAATTAGAACAGTGGTGCGTTGAGGCAACAGAGGAGTATACTGGCTCAGCTTGGGATGAACTGAAACATATCAGACAGGCTGTTGGATTCCTGGTGATACATCAAAAACCCAAAAAGTCCCTAAATGAAATAACAAAGGAGCTTTGCCCTGTTCTCAGTATACAGCAGCTATACAGGATAAGTACAATGTACTGGGATGACAAGTACGGCACTCACAGTGTGTCTACAGACGTTATAACAAGCATGAGAGCTATGATGTCTGATGACTCTAATAATGCTGTCAGCACTTCTTTCCTATTAGATGATGACTCGAGCATTCCATTTTCGGTGGATGACATTTCCAAATCAATACAACAAATAGAAGTAGCTGACGTGGATCCTCCTCCGTTGATACGTGAGAACTCAGGATTTGGGTTCTTACTAGCACGCTCAGAGTGA 4773 0.4127 MNLKKGRFDNRLSNSKEVLN*IVVLNSKLPFCTVRSDSPSPPFFLDSDELVLKDRSALIAMSAPVNIIVGSHVWVEDPAQAWIGGEVIKINGEEVHVRTGDGKTVVKNISKVFPKDNEAPPGGVDDMTKLSYLHEPGVLHNLATRYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAAFGELSPHVFAVADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDNKGRISGAAIRTYLLERSRVCQISNPERNYHCFYLLCAAPAEEKEKYKLGSPSSFHYLNQSNCYVLDGVDDAEEYLATRRAMDVVGISEEEQDAIFRVIAAILHLGNIEFAKGEEIDSSVLKDEKSRFHLNMTAELLKCDAKSLEDALIKRVMITPEEVITRTLDPDAALSSRDALAKTSYSRLFDWLVEKINNSIGQDPNSKSIIGVLDIYGFESFKFNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEIDWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFSQKLYQTFKNNKRFIKPKLSRTSFTISHYAGEVTYLADMFLDKNKDYVVAEHQDLLTASKCSFVAGLFPPSQEESSKSSKFSSIGSRFKLQLQSLMETLSSTEPHYIRCVKPNNVLRPAIFENLNIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLNRFGVLAPEVLDGNCDDKVACQMILDKMGMKGYQIGKAKVFLRAGQMAELDARRAEVLGNAARIIQRQIRTHIARKEFIELRQAAISLQSNLRGILARKLYEQLRREAAALKIEKNFKGYIARKSYLKERSSAIILQTGLRAMKARDEFRFRKQTKAAIHVQAHMRRLIAYSYYKRLQKAAVVTQCGWRRRVARRELRMLKMAARETGALKEAKDKLEKRVEELTWRLQIEKRLRTDLEEEKAQEIAKLQDALHAMQIQVEESNARVVKEREAAQKAIKEAPPVIKETPVIIQDTEKLNSLLAEVNSLKESLLSEREAKEEARKAQVEAEARKMELAKKVEDSDRKVDQLQELVQRLEEKISNAESENQVLRQQALAVSPTGKTLSARPRTVIIQRTPENGNALNGEAKIGSDMTLAVSNLREPESEGKPQKSLNEKQQENQDLLIKCITQDLGFSGGKPVAACVIYKCLLHWRSFEVERTSVFDRIIQTIASAVEAQDNTDVLAYWLSNTSTLLLLLQRTLKASGAASLTPQRRRTASSSLFGRMSQGLRASPQSAGLSFINGRGLSRLDDLRQVEAKYPALLFKQQLTAFLEKIYGMIRDNLKKEISPLLGLCIQAPRTSRQGLVKGRSHANAVAQQALIAHWQSIVNSLNNYLKIMKANYAPPFLVRKVFTQIFSFVNVQLFNSLLLRRECCSFSNGEYVKTGLAELEQWCVEATEEYTGSAWDELKHIRQAVGFLVIHQKPKKSLNEITKELCPVLSIQQLYRISTMYWDDKYGTHSVSTDVITSMRAMMSDDSNNAVSTSFLLDDDSSIPFSVDDISKSIQQIEVADVDPPPLIRENSGFGFLLARSE* 1591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g05165 1589 SMART iq_5 793 815 IPR000048 GO:0005515
Rops2g05165 1589 SMART iq_5 912 934 IPR000048 GO:0005515
Rops2g05165 1589 SMART iq_5 841 863 IPR000048 GO:0005515
Rops2g05165 1589 SMART iq_5 816 838 IPR000048 GO:0005515
Rops2g05165 1589 SMART iq_5 889 911 IPR000048 GO:0005515
Rops2g05165 1589 SMART iq_5 864 886 IPR000048 GO:0005515
Rops2g05165 1589 ProSiteProfiles IQ motif profile. 796 823 IPR000048 GO:0005515
Rops2g05165 1589 Pfam DIL domain 1408 1511 IPR002710 -
Rops2g05165 1589 ProSiteProfiles Myosin motor domain profile. 121 791 IPR001609 GO:0003774|GO:0005524|GO:0016459
Rops2g05165 1589 Coils Coil 1034 1110 - -
Rops2g05165 1589 Coils Coil 936 1016 - -
Rops2g05165 1589 ProSiteProfiles IQ motif profile. 913 942 IPR000048 GO:0005515
Rops2g05165 1589 ProSiteProfiles IQ motif profile. 842 868 IPR000048 GO:0005515
Rops2g05165 1589 Gene3D - 726 789 - -
Rops2g05165 1589 ProSiteProfiles Dilute domain profile. 1221 1532 IPR002710 -
Rops2g05165 1589 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 67 116 IPR004009 GO:0003774|GO:0005524|GO:0016459
Rops2g05165 1589 ProSiteProfiles IQ motif profile. 865 894 IPR000048 GO:0005515
Rops2g05165 1589 SMART MYSc_2a 115 792 IPR001609 GO:0003774|GO:0005524|GO:0016459
Rops2g05165 1589 CDD MyosinXI_CBD 1172 1555 IPR037975 GO:0007015
Rops2g05165 1589 FunFam Class V myosin 498 640 - -
Rops2g05165 1589 SMART DIL_2 1407 1514 IPR002710 -
Rops2g05165 1589 PRINTS Myosin heavy chain signature 488 516 IPR001609 GO:0003774|GO:0005524|GO:0016459
Rops2g05165 1589 PRINTS Myosin heavy chain signature 151 170 IPR001609 GO:0003774|GO:0005524|GO:0016459
Rops2g05165 1589 PRINTS Myosin heavy chain signature 255 282 IPR001609 GO:0003774|GO:0005524|GO:0016459
Rops2g05165 1589 PRINTS Myosin heavy chain signature 208 233 IPR001609 GO:0003774|GO:0005524|GO:0016459
Rops2g05165 1589 PRINTS Myosin heavy chain signature 541 569 IPR001609 GO:0003774|GO:0005524|GO:0016459
Rops2g05165 1589 Gene3D Kinesin motor domain 124 721 IPR036961 -
Rops2g05165 1589 Pfam Myosin N-terminal SH3-like domain 68 105 IPR004009 GO:0003774|GO:0005524|GO:0016459
Rops2g05165 1589 Gene3D - 311 369 - -
Rops2g05165 1589 Gene3D - 844 892 - -
Rops2g05165 1589 Gene3D - 794 843 - -
Rops2g05165 1589 Gene3D - 893 941 - -
Rops2g05165 1589 Pfam Myosin head (motor domain) 123 779 IPR001609 GO:0003774|GO:0005524|GO:0016459
Rops2g05165 1589 Gene3D - 70 114 IPR008989 GO:0003774|GO:0005524|GO:0051015
Rops2g05165 1589 FunFam Myosin 2 371 486 - -
Rops2g05165 1589 Gene3D - 498 682 - -
Rops2g05165 1589 PANTHER MYOSIN 117 1520 - -
Rops2g05165 1589 Pfam IQ calmodulin-binding motif 818 837 IPR000048 GO:0005515
Rops2g05165 1589 Pfam IQ calmodulin-binding motif 796 814 IPR000048 GO:0005515
Rops2g05165 1589 Pfam IQ calmodulin-binding motif 915 934 IPR000048 GO:0005515
Rops2g05165 1589 FunFam Myosin XI D 726 789 - -
Rops2g05165 1589 ProSiteProfiles IQ motif profile. 817 846 IPR000048 GO:0005515
Rops2g05165 1589 FunFam unconventional myosin-Va 845 892 - -
Rops2g05165 1589 FunFam unconventional myosin-Va 796 844 - -
Rops2g05165 1589 FunFam unconventional myosin-Va 893 940 - -
Rops2g05165 1589 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 92 844 IPR027417 -
Rops2g05165 1589 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 844 942 IPR027417 -
Rops2g05165 1589 CDD MYSc_Myo11 135 779 IPR036018 -
Rops2g05165 1589 FunFam Myosin heavy chain 311 366 - -
Rops2g05165 1589 ProSiteProfiles IQ motif profile. 890 916 IPR000048 GO:0005515
Rops2g05165 1589 Gene3D Myosin VI head, motor domain, U50 subdomain 371 660 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g05165 Rops-Chr2 92348826 92367454 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g05165 126 1589 Myosins gene family AT5G20490 82.377 0.0 2517
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g05165 K10357 - gmx:100777802 2817.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g05165 2 92348826 92367454 Rops2g05165 2 92348826 92367454 ECH