Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g05157 ATGCTTACATGCATAGCTCGTCCCAAGAAACCAGGGAGCGACTCACTGAGTAAACCCGATGATTCCGATCCTAACAAAAACCAAGCCATCAAATCCCTCACATCTCAGATAAAGGATATGGCGTTGAAGGCATCGGGTGCCTACAAGCATTGTGCTCCCTGCACGGGGCCACCGACGCAGGGTCGAATGAGGACCAATACTGAGTCAGACGCTGACTCGGATCGGTTCCGATGGTCTTACCGGAGAACAGGGAGTTCGAGCTCGACGACGACGAGGGCATGGGGGAAGGAGATGGAGGCAAGGCTGAAGGGGATTTCGAGCGGCGAGGGGACGCCGAACTCCGCCAGTGGACGACGTGTGGAGCCGGTGGTGCTGTTCGTGGAAGAGAACGAACCGAAGGAGTGGGTGGCGCAAGTGGAGCCTGGCGTTTTGATTACCTTCTTGTCGTTGCCACGTGGCGGGAACGATCTTAAACGCATACGCTTCAGTCGAGAGATGTTCAACAAATGGCAAGCTCAAAGGTGGTGGGCGGAGAACTATGACAAGGTCATGGAACTTTACAATGTTCAAAGGTTAAACCGACAAGCATTCCCCCTTCCAACGCCACCAAGGTCTGAAGATGAGAGCTCAAAGCTTGAATCAGCAGAAGAAAGCCCTGTAACGCCTCCACTAACCAGGGAACGGTTGCCTCGTAATACATACCGTCCCACAGGGATGGGAATGGGATACTCATCCTCTGATTCCTTTGATCATCAGTCAATGCAATCCCGACATTTCTTTGACTCGAACGGTATGAATTCAACCCCAAAAGTCTCCACCATTAGTGCAGCCAAGACAGAGATATCATCAATGGATGCTTCTATCAGAAGTAGCTCATCGAGAGAGGCTGATCGCTCGGGTGATTTTTCAATCAGCAATGCCAGTGACTTGGAGACTGAATGGGTTGAGCAGGATGAACCTGGGGTATACATTACCATCAGAGCTTTGCCAGGTGGCAAAAGGGAGCTCAGAAGAGTCAGGTTCAGCCGAGAAAAATTTGGGGAGATGCATGCTAGATTATGGTGGGAGGAGAACCGTGCCAGAATACATGAACAATACTTGTGA 1104 0.5118 MLTCIARPKKPGSDSLSKPDDSDPNKNQAIKSLTSQIKDMALKASGAYKHCAPCTGPPTQGRMRTNTESDADSDRFRWSYRRTGSSSSTTTRAWGKEMEARLKGISSGEGTPNSASGRRVEPVVLFVEENEPKEWVAQVEPGVLITFLSLPRGGNDLKRIRFSREMFNKWQAQRWWAENYDKVMELYNVQRLNRQAFPLPTPPRSEDESSKLESAEESPVTPPLTRERLPRNTYRPTGMGMGYSSSDSFDHQSMQSRHFFDSNGMNSTPKVSTISAAKTEISSMDASIRSSSSREADRSGDFSISNASDLETEWVEQDEPGVYITIRALPGGKRELRRVRFSREKFGEMHARLWWEENRARIHEQYL* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g05157 367 MobiDBLite consensus disorder prediction 1 31 - -
Rops2g05157 367 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 367 IPR044532 -
Rops2g05157 367 ProSiteProfiles BRX domain profile. 312 367 IPR013591 -
Rops2g05157 367 MobiDBLite consensus disorder prediction 53 72 - -
Rops2g05157 367 Pfam Transcription factor BRX N-terminal domain 27 54 IPR027988 -
Rops2g05157 367 Pfam Transcription factor regulating root and shoot growth via Pin3 133 187 IPR013591 -
Rops2g05157 367 Pfam Transcription factor regulating root and shoot growth via Pin3 311 366 IPR013591 -
Rops2g05157 367 ProSiteProfiles BRX domain profile. 133 188 IPR013591 -
Rops2g05157 367 MobiDBLite consensus disorder prediction 196 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g05157 Rops-Chr2 92260101 92264933 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g05157 1 367 Major Intrinsic Protein MIP AT1G31880 44.872 1.09e-94 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g05157 - - gmx:100794109 649.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g05157 2 92260101 92264933 Rops2g05157 2 92260101 92264933 ECH
Rops2g05157 2 92260101 92264933 Rops11g01812 11 29143017 29149861 PCT