Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g05149 ATGGTTGTTGTCCACCACCTCTTTTCCACACGTTGGGGATCTTCACAAGGGCTAGGGCCATGGCCATCGGGGAGGCCTGGAACACTGATGTGGAGGTTCCATTTTGAAGGGATACGGAAGGCTGTCAAAGGGTACCAGATTACCTACATGCATATACTACATGCTACTTCAGATTTTGAGATGAGGCTATTATGGTTGCCAAGTAGGTTAAGGTCAAAGGGAAGAGGTTGGCGTGAAACTGTAAAAAATTGTGGGTATAGTAAGAGGACACGTCATGGTTCATCAATATATGTGGAAAAGCAAATACCATTTATTGGGATATTGAGCAACAAAGCTGAGGGAATTCCAGATTTTTCAATGAAAATTCATTATTGTGATGGTGCATCATTTAGAAGGGATAGTCAACGTCAGGCAGCAGGGTTATATCTCAGAGAGCAACGCATTTGGCAAGCTGCTATGGAAGACTTAATGTCAAAAGGGATGCGCTATGCCAAACCGGCTCTTCTATCTGGATACTCTGCAGGAGGCTTAGCATCTATCTTTGCATTGTGA 552 0.4384 MVVVHHLFSTRWGSSQGLGPWPSGRPGTLMWRFHFEGIRKAVKGYQITYMHILHATSDFEMRLLWLPSRLRSKGRGWRETVKNCGYSKRTRHGSSIYVEKQIPFIGILSNKAEGIPDFSMKIHYCDGASFRRDSQRQAAGLYLREQRIWQAAMEDLMSKGMRYAKPALLSGYSAGGLASIFAL* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g05149 183 Pfam Pectinacetylesterase 73 181 IPR004963 GO:0016787
Rops2g05149 183 PANTHER NOTUM-RELATED 71 181 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g05149 Rops-Chr2 92184415 92186594 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g05149 73 181 Carbohydrate Esterase AT1G57590 61.062 1.38e-38 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g05149 K19882 - gmx:100791571 163.696