Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g05133 ATGGGCTCACCACAAAGACCATGTTGCAAGGCTCAAGACGCTGAGCATGGTAATGAACGGGTCCCTAAGATTAGCATTAAGGTGGCTCGTGTGACAAGGTGGGAGAGGTTTCTGCCTCGGGTGGTGCTGAGGGTTTTGCTGGTCGAAGCTGATGATTCTACTCGCCAGATCTTTGCTGCTCTTCTCCGTGAATGCAGTTACAGAGTTGCTGCAGTTCGTGATGGCTTAAAGGCATGGGGGACATTGAAGAACAAAGCACCCGAGATAGGTCTCATATTAACAGAAGTGGAGTTGCCATCAATATCTGGATTTTCACTTCTTACTTCAATCATGGAGCATGACATTTGCAAAAACATTCCTGCCATAAGGATGTCTTCACGTGATTCAGTTGGCATGGCATTCAAATGCATGTTAAAAGGTGCAACTTCCTTTCTTTTCACTGAATACCGTTCGGGCTCCGCATTTAAGTAA 471 0.4607 MGSPQRPCCKAQDAEHGNERVPKISIKVARVTRWERFLPRVVLRVLLVEADDSTRQIFAALLRECSYRVAAVRDGLKAWGTLKNKAPEIGLILTEVELPSISGFSLLTSIMEHDICKNIPAIRMSSRDSVGMAFKCMLKGATSFLFTEYRSGSAFK* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g05133 156 ProSiteProfiles Response regulatory domain profile. 44 156 IPR001789 GO:0000160
Rops2g05133 156 PANTHER TWO-COMPONENT RESPONSE REGULATOR 43 145 IPR045279 GO:0009736
Rops2g05133 156 SUPERFAMILY CheY-like 43 145 IPR011006 -
Rops2g05133 156 Gene3D - 39 152 - -
Rops2g05133 156 Pfam Response regulator receiver domain 45 146 IPR001789 GO:0000160
Rops2g05133 156 SMART REC_2 43 155 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g05133 Rops-Chr2 92020642 92021265 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g05133 20 150 Response Regulator Gene Family AT5G24470 65.649 5.42e-55 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Rops2g05133 Response_reg 1.4e-13 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g05133 K12130 - gmx:100791698 171.4