Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g05129 ATGAAAATCACGTTGAAATCCTTCTTTCCCAGTTGTTATAAGGGTGAGCACTCCTCACCAAAGCCAACGAAAGTGGTGGTTACAAAGTCTAGTAGTAATTCTTATAACAGGATCTCTGTGTCGGATTTGAGTTTTCCAAGCACCACCACAACGCTTACAGAAGATCTCTCCATTTCTCTAGCAGGGTCTAACCTGCATGTTTTTTCACTTGCTGAGTTAAAGATTATCACACAGAGCTTCTCTTCTAGTAACTTTCTCGGAGAAGGAGGGTTTGGACCTGTGCATAAGGGGTTCATTGATGACAAGCTTAGGCCTGGTCTTGAGGCTCAGCCTGTGGCTGTGAAACTCTTGGATTTGGATGGTACTCAGGGTCATAAAGAGTGGCTGACTGAAGTTGTGTTTCTGGGTCAACTCAGGCATCAACACCTAGTGAAGTTGATTGGATATTGCTGTGAAGAAGAACATAGGCTTTTGGTATATGAATATTTACCACGAGGCAGTTTAGAGAATCACCTATTTAGAAGATTCTCAGCACCGTTACCATGGTCCACAAGAATGAAAATTGCTTTTGGAGCTGCAAAGGGTCTAGCTTTTTTACATGAAGCAAAGAAACCAGTCATCTATAGAGATTTCAAAGCTTCAAACATCTTGTTAGACTCTGATTACAATGCAAAACTCTCTGATTTTGGTTTGGCAAAAGATGGTCCTGAAGGAGACGACACACATGTTTCAACTAGAGTTATGGGCACCCAAGGATACGCAGCCCCAGAATATATCATGACAGGACACTTGACAGCTATGAGTGATGTGTATAGCTTTGGTGTTGTCCTTTTGGAACTGTTAACTGGGAGAAGATCAGTGGACAAGGGACGCCCACAAAGGGAACAGAACCTAGTGGAATGGGCCAGGCCAGTTTTAAATGATTCAAGGAAACTTGGCCGAATAATGGATTCAAGACTTGAGGGACAATATTCCGAGATGGGGGCAAGAAAAGCAGCTGCATTGGCTTATCAATGTCTCAGCCACAGGCCAAGGAATAGACCTTCAATGACTACAGTGGTTAAGACTCTAGAGCCTCTTAAGGATTTTAATGATGAGATTCCAATTGGACCCTTTGTTTACACGGTTCCAACTGATAATGAAGTGAATAAAGTTGCAAAAGAGATCGGAACACCTAAGGAGAGGAAAAGGGAAAATGGTCATCATCACAACAATGGCCATAAGCATTTTAATGATGAAGACGTGTATCAAGATGCAAAAGAATGTGACACACCTAGGGAAAGGAAAAGGGAAAATGATCATCATCACCGAAATCACCATCGCCACAATGGCCATAGACATCCACTTAGATCATCCAAGTCACGGTCACAAAATGAAGAACGCCGAAATGGTAGAAGTGGGTCAACCTCACCTGACACCTGCAATGCATCAGAAGGGCAAGGAAGCATATCTTAG 1455 0.4275 MKITLKSFFPSCYKGEHSSPKPTKVVVTKSSSNSYNRISVSDLSFPSTTTTLTEDLSISLAGSNLHVFSLAELKIITQSFSSSNFLGEGGFGPVHKGFIDDKLRPGLEAQPVAVKLLDLDGTQGHKEWLTEVVFLGQLRHQHLVKLIGYCCEEEHRLLVYEYLPRGSLENHLFRRFSAPLPWSTRMKIAFGAAKGLAFLHEAKKPVIYRDFKASNILLDSDYNAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYIMTGHLTAMSDVYSFGVVLLELLTGRRSVDKGRPQREQNLVEWARPVLNDSRKLGRIMDSRLEGQYSEMGARKAAALAYQCLSHRPRNRPSMTTVVKTLEPLKDFNDEIPIGPFVYTVPTDNEVNKVAKEIGTPKERKRENGHHHNNGHKHFNDEDVYQDAKECDTPRERKRENDHHHRNHHRHNGHRHPLRSSKSRSQNEERRNGRSGSTSPDTCNASEGQGSIS* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g05129 484 FunFam Serine/threonine-protein kinase BIK1 47 162 - -
Rops2g05129 484 FunFam Probable serine/threonine-protein kinase PBL8 163 370 - -
Rops2g05129 484 MobiDBLite consensus disorder prediction 389 431 - -
Rops2g05129 484 SUPERFAMILY Protein kinase-like (PK-like) 56 358 IPR011009 -
Rops2g05129 484 Gene3D Transferase(Phosphotransferase) domain 1 163 367 - -
Rops2g05129 484 ProSitePatterns Serine/Threonine protein kinases active-site signature. 206 218 IPR008271 GO:0004672|GO:0006468
Rops2g05129 484 CDD STKc_IRAK 86 360 - -
Rops2g05129 484 MobiDBLite consensus disorder prediction 432 451 - -
Rops2g05129 484 MobiDBLite consensus disorder prediction 389 484 - -
Rops2g05129 484 Pfam Protein tyrosine and serine/threonine kinase 84 357 IPR001245 GO:0004672|GO:0006468
Rops2g05129 484 Gene3D Phosphorylase Kinase; domain 1 45 162 - -
Rops2g05129 484 ProSiteProfiles Protein kinase domain profile. 80 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g05129 484 MobiDBLite consensus disorder prediction 452 466 - -
Rops2g05129 484 PANTHER OS01G0588500 PROTEIN-RELATED 40 361 - -
Rops2g05129 484 MobiDBLite consensus disorder prediction 467 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g05129 Rops-Chr2 91951146 91953443 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g05129 66 357 Glycoside Hydrolase AT3G07070 54.237 1.99e-102 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Rops2g05129 PK_Tyr_Ser-Thr 3.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g05129 - - gmx:100799411 702.205