Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g05128 ATGACTACTACCACTACTTTAGAGGAGTTAACACTCTCTTATAAAGCTTTAAACGATGCTTGCCCTTATTCAAAGTTTGCACATTTAACTGCTAATCAAACTATACTTGAAGCTACAGAAGGAGTCAGTGAGATTCACATAGTTGATTTTGGGATTATTCAAGGGATTCAATGGGCTGCACTGTTGCAAGCATTTGCTACACATTCTTCTGGGAAGCCTCAAAGGATAAGAATTATAGGGATACCTGCTATGGCTTTTGAAACTTCACTTGTTCCTTCTCTTTCTGCAACTGGGAATCATCTTTCTAAGTTTGCAAAGCTTGTTGGGTTGAATTTCGAGTTTAATCACCACTTTTCTTTTCCTTTTCCTTGGTTCCCTCTTGAAAGAGCATCAAATAAGGTGCAAACGCTTTCACAAGCTTTCCAAGCTTATATTACAGTTCTGCTCACACTTATGGCTAGCTTACAACGTTGTTAA 477 0.3816 MTTTTTLEELTLSYKALNDACPYSKFAHLTANQTILEATEGVSEIHIVDFGIIQGIQWAALLQAFATHSSGKPQRIRIIGIPAMAFETSLVPSLSATGNHLSKFAKLVGLNFEFNHHFSFPFPWFPLERASNKVQTLSQAFQAYITVLLTLMASLQRC* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g05128 158 ProSiteProfiles GRAS family profile. 1 158 IPR005202 -
Rops2g05128 158 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 8 118 IPR005202 -
Rops2g05128 158 Pfam GRAS domain family 3 116 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g05128 Rops-Chr2 91946946 91947905 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g05128 8 114 GRAS Transcription Factor Family AT5G66770 70.093 5.15e-46 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Rops2g05128 GRAS 4.7e-34 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g05128 - - adu:107477343 177.563