Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g05120 ATGCAAATTCCCACCCTCCGAACCATTAGCTTCGTCAACAACTCCTTCTCTGGTCCCATGCCAGAATTCAACAAACTTGGTGCTCTTAAGGCTATTTACTTAGCTAAGAACCAATTTTCAGGTCCCATTCCTCCCGATTTCTTCTCCCAGTTAGCTTCTTTGAAGAAAGTATGGATCTCAGATAACAAGTTCTCTGGTGACATACCTGAGTCTTTGACAAACCTTAGGTTTCTCACCGAGTTGCACCTCGAGAACAACGAGTTTTCTGGGCCTATACCTGAACTAAAACAAGATATTAAATCTATGGACATGTCGAACAACAAGTTAGAAGGTGCAATACCTGCTAGCATGACGAGGTTTGGTGCAAACTCGTTCGCTGGCAATGAAGGGCTTTGTGGGCAGCCTTTGGATAAGGAGTGTGATCCATCTCTGATGCCAAACGCTGGAAAAGGTCAAGAGTCAGGTTGGGCCTGGAAGGTCATCGCCATTATCGTTGTTGCTGCGATTATTGCGTTGATTTTCACGTTTTTGAAGTCAAGGCGAAGCGGTGAAGATGATGATTTTAGTGTGATGAGTAGAGAAACCACGGAGGAGGTTGTGCAAGTGCACGTGCCAAGTTCAAACCGTAGTAGGGCCTCTGAAAGTAGTAAAAAGGAATCGAAGAAAGGGTCTTCGAGGGGTGGGATGGGTGATCTTATAATGGTGAATGATGAAAAGGGTGTGTTTGGGTTACCAGATTTGATGAAGGCCGCTGCTGAGGTTTTGGGAAATGGGGGGTTGGGTTCGGCTTACAAGGCTTCCATGACTAATGGCTTGTCTGTGGTCGTGAAGAGGATGAGGGAGATGAATAAAGTAAGCAGAGACATCTTTGATGCTGAGATGAGACGGTTTGGGAGGCTCAGAAACCATAACGTTATGACGCCTCTGGCTTACCATTACCGCAAGGAGGAGAAGTTATTTGTCACCGAATACATGCCCAAAGGAAGCTTATTATATGTCTTGCATGGTGATAGAGGATCAAGTCATGCTGAGCTGAACTGGTCTACCCGTTTGAAGATTGTGAAGGGAATTGCAAGAGGGTTGGGCTTTCTTTATACTGAATTTTCTTCCGAAGACTTGCCACATGGAAACCTTAAATCCAGCAATATTCTACTGTGTGATGATCACGAGCCTCTCCTAAGTGACTATGCCTTTCATGCACTCATGAACCCCAACTATGCCGTACAGACAATGTTTGCCTACAAAACTCCTGATTACATGATGTACCAACAAGTTTCACAGAAGACTGACGTTTATTGCCTTGGAATTATCATTCTTGAAATCATTACTGGGAAATTCCCTTCTCAGTATCACAGTAATGGCAAGGGTGGGACTGATGTGGTGCAATGGGTCTTCACAGCTATTTCTGAGAGAAGAGAGGCAGAATTGATTGATCCAGAGTTAACAAGCAATAATCCAAATTCAATCAATCAAATGCTGCAACTTCTCCAAATTGGGGCTGCTTGCACAGAAAGCAACCCTGAACAAAGACTTAACATGAAGGAAGCCATTAGGAGGATAGAGGAGGTACAGGTTTAA 1578 0.4423 MQIPTLRTISFVNNSFSGPMPEFNKLGALKAIYLAKNQFSGPIPPDFFSQLASLKKVWISDNKFSGDIPESLTNLRFLTELHLENNEFSGPIPELKQDIKSMDMSNNKLEGAIPASMTRFGANSFAGNEGLCGQPLDKECDPSLMPNAGKGQESGWAWKVIAIIVVAAIIALIFTFLKSRRSGEDDDFSVMSRETTEEVVQVHVPSSNRSRASESSKKESKKGSSRGGMGDLIMVNDEKGVFGLPDLMKAAAEVLGNGGLGSAYKASMTNGLSVVVKRMREMNKVSRDIFDAEMRRFGRLRNHNVMTPLAYHYRKEEKLFVTEYMPKGSLLYVLHGDRGSSHAELNWSTRLKIVKGIARGLGFLYTEFSSEDLPHGNLKSSNILLCDDHEPLLSDYAFHALMNPNYAVQTMFAYKTPDYMMYQQVSQKTDVYCLGIIILEIITGKFPSQYHSNGKGGTDVVQWVFTAISERREAELIDPELTSNNPNSINQMLQLLQIGAACTESNPEQRLNMKEAIRRIEEVQV* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g05120 525 SUPERFAMILY L domain-like 3 119 - -
Rops2g05120 525 MobiDBLite consensus disorder prediction 194 211 - -
Rops2g05120 525 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 1 92 - -
Rops2g05120 525 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 3 524 IPR046959 -
Rops2g05120 525 SUPERFAMILY Protein kinase-like (PK-like) 253 520 IPR011009 -
Rops2g05120 525 Gene3D Phosphorylase Kinase; domain 1 255 325 - -
Rops2g05120 525 Pfam Protein kinase domain 253 518 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g05120 525 Gene3D Transferase(Phosphotransferase) domain 1 326 525 - -
Rops2g05120 525 ProSiteProfiles Protein kinase domain profile. 249 525 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g05120 525 Gene3D Ribonuclease Inhibitor 1 144 IPR032675 -
Rops2g05120 525 MobiDBLite consensus disorder prediction 192 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g05120 Rops-Chr2 91799796 91803007 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g05120 3 525 Receptor kinase-like Gene Family AT3G42880 53.650 0.0 578
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Rops2g05120 Pkinase 3.6e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g05120 - - lja:Lj5g3v1749280.1 855.514