Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g05105 ATGCAAACACAAACACATAACACGTTCTCCCTCACACTCACTGCTCTCTTGCTCTTGTTGCTATCTCCGTCATTTTTAGCAGCAAGAACAACACCGCAAGATCTGCTCCGTTCATCATGTGCCCAAGCCAGGTACCCCACCCTCTGTGTCCAAACCCTCTCCAACAACGTAGGTCCCACCATGAAACCCTTGGACATGGCTCAAGTCTCCGTCAACGTTAGTCTCACTAAAGCTCAGACCCTATCCCTTTACCTCAAGACGCTGAAGGTGTCCACCAACAGGCAGCGAGTTGCGCTGAGTGACTGCAAGGCTCAGATTTCTGACTCTGTGACTCAGTTGAACATGACACTCAACGAGTTACGCCACCTCCGAACGGCGTCGTTTCAGTGGCAGATGAGTAACGCCATGACATGGGCCAGCACCGCCTTGACCAACGGCAACGCCTGCGTCAACGGCTTAAACCGCAGCGACGCCGACGGGAAGCTCAAGTTGGAGGTGAAACGTAGGGTCACCGACGTAGCCATGCTTACCAGCAACGCTTTGTACATGATCCACCGCCTTGGTGATAGCAAGAGTGGCAAGCATAGCTCCAATTCCAAAAACTGA 606 0.5264 MQTQTHNTFSLTLTALLLLLLSPSFLAARTTPQDLLRSSCAQARYPTLCVQTLSNNVGPTMKPLDMAQVSVNVSLTKAQTLSLYLKTLKVSTNRQRVALSDCKAQISDSVTQLNMTLNELRHLRTASFQWQMSNAMTWASTALTNGNACVNGLNRSDADGKLKLEVKRRVTDVAMLTSNALYMIHRLGDSKSGKHSSNSKN* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g05105 201 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 33 187 IPR035513 -
Rops2g05105 201 CDD PMEI-like_3 38 187 - -
Rops2g05105 201 Pfam Plant invertase/pectin methylesterase inhibitor 35 182 IPR006501 GO:0004857
Rops2g05105 201 PANTHER PECTINESTERASE INHIBITOR-LIKE 16 182 - -
Rops2g05105 201 SMART PMEI_2 31 183 IPR006501 GO:0004857
Rops2g05105 201 Gene3D Invertase/pectin methylesterase inhibitor family protein 31 188 IPR035513 -
Rops2g05105 201 NCBIfam pectinesterase inhibitor domain 9 187 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g05105 Rops-Chr2 91529033 91529638 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g05105 21 190 Carbohydrate Esterase AT3G14310 30.114 2.41e-16 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g05105 - - mtr:25494163 234.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g05105 2 91529033 91529638 Rops2g05105 2 91529033 91529638 ECH