Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g05099 ATGGGCTCAAAAGATTCCAATAACCATTCTGGTGTGAACCATGGGGGCATATCACCAATGATTCATAAGAGGCTAACCAATATTGTGTATTGTGACTCGGATGATGATAGTACCTGCAATAGTCCTCAACCACCTCATGATGTTCCCAAAGGATACTTAGCTGTTTATGTTGGGCCAGAGCTTAGGAGGTTCATTATTCCCACAAGTTACCTTACCCATTCTTTGTTCAAAATGTTGCTGGAAAAGGCTGCAGAGGAATTTGGGTTTGACCAAAGTGGAGGACTCACGATTCCTTGTGAAATTGAGACCTTTAAATACCTCCTGAACTACATAGAGAACCATCAGGACCATGATGATAACTCCACTGGAAACACAGGAACTATGGAAGAGTAA 393 0.4198 MGSKDSNNHSGVNHGGISPMIHKRLTNIVYCDSDDDSTCNSPQPPHDVPKGYLAVYVGPELRRFIIPTSYLTHSLFKMLLEKAAEEFGFDQSGGLTIPCEIETFKYLLNYIENHQDHDDNSTGNTGTMEE* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g05099 130 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 36 107 IPR003676 GO:0009733
Rops2g05099 130 Pfam Auxin responsive protein 39 110 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g05099 Rops-Chr2 91448756 91449638 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g05099 1 130 Calmodulin-binding Proteins AT3G43120 62.879 9.61e-56 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g05099 K14488 - gmx:100795275 225.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g05099 2 91448756 91449638 Rops2g05099 2 91448756 91449638 ECH
Rops2g05099 2 91448756 91449638 Rops11g01887 11 30523081 30525685 PCT