Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g05094 ATGGGAAGAGAAAGAGAGGCACCAAAGCAACAACAAGCTTACACAGTGGAGCAGCTTGTTGCCTTCAATCGATACAATCCTGATATTCTTCCAGATCTCGAAAACTATGTCAATGACCAGGTTTCATCACAAACATACAGCTTGGATGCAAATCTGTGCCTTCTTCGCCTCTACCAGTTTGAACCAGAGAAGATGAGTTCCCAGATTGTAGCTCGCATATTGGTTAAGGCCCTCATGGCAATGCCAGCTCCAGACTTCAGTCTGTGTCTCTTTTTGATTCCAGAACGTGTGCAAATGGAGGAGCAGTTCAAGACACTGATTGTTCTGTCTCACTATTTGGAGACAGGAAGATTTCGGCAGTTCTGGGATGAAGCAGCAAAATGTCGTCATATAGTTGAAGCTGTGCCAGGATTTGAGCAGGCAATCCAAGGCTATGCCATTCATGTCCTTTCCTTGACTTACCAAAAGGTTCCTAGAACTGTTCTTGCTGAGGCTATCAACATTGAAGGTTTATCCTTGGACAAATTCCTCGAACACCAAGTAGCCAACAGTGGTTGGGCTATTGAGAAAAGCCAAGGCAGGGGTCAACTCATTGTCCTTCCTAGAAATGAATTTAATGACCCAATTTTGAAGAAAAACACCACAGATAGTGTACCATTGGAGCACATTACTCGCATTTTCCCTATTCTTAGCTGA 696 0.4382 MGREREAPKQQQAYTVEQLVAFNRYNPDILPDLENYVNDQVSSQTYSLDANLCLLRLYQFEPEKMSSQIVARILVKALMAMPAPDFSLCLFLIPERVQMEEQFKTLIVLSHYLETGRFRQFWDEAAKCRHIVEAVPGFEQAIQGYAIHVLSLTYQKVPRTVLAEAINIEGLSLDKFLEHQVANSGWAIEKSQGRGQLIVLPRNEFNDPILKKNTTDSVPLEHITRIFPILS* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g05094 231 Gene3D ARM repeat; domain 1 7 124 IPR016020 GO:0003743|GO:0005852|GO:0006446|GO:0043022
Rops2g05094 231 FunFam Eukaryotic translation initiation factor 3 subunit K 127 230 - -
Rops2g05094 231 ProSiteProfiles PCI domain profile. 46 205 IPR000717 -
Rops2g05094 231 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 11 8 228 IPR009374 GO:0003743|GO:0005737|GO:0005852
Rops2g05094 231 SUPERFAMILY ARM repeat 7 133 IPR016024 -
Rops2g05094 231 Gene3D - 128 230 IPR036388 -
Rops2g05094 231 Hamap Eukaryotic translation initiation factor 3 subunit K [EIF3K]. 7 231 IPR009374 GO:0003743|GO:0005737|GO:0005852
Rops2g05094 231 FunFam Eukaryotic translation initiation factor 3 subunit K 8 124 - -
Rops2g05094 231 SUPERFAMILY "Winged helix" DNA-binding domain 136 228 IPR036390 -
Rops2g05094 231 Pfam CSN8/PSMD8/EIF3K family 66 192 IPR033464 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g05094 1 231 Eukaryotic Initiation Factors Gene Family AT4G33250 76.623 1.38e-131 368
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g05094 K15028 - gmx:100306445 424.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g05094 2 91321981 91331381 Rops2g05094 2 91321981 91331381 ECH