Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g05093 ATGGAGAATGAACAACCTTCTAACTCTCCCTCTGCCTGTGATGAAACCCGTCCTTCCCCCCAAGTTTGTATGCAGAAATTTAGGCTATATGAGACTCGATCGAACTTTTACATGATAGGAAGGGACAAGAGCAGGACATATTGGAGGGTACTAAAGATTGACCGTCTAGATCCTTCTGAGCTAAACTTGCGTGAAGACTCCACCACATATACAGAACGTGAATGTTCTGATCTTTTGAGGCGGATACATGAGGGGAACTTGTCCACAGGTGGACTGAAATTTGTTACAACTTGTTATGGAATTGTTGGGTTCATCAAATTTTTGGGACCTTACTACATGCTGCTTATCACGAAAAGAAGGCAAATTGGTGCAATCTGTGGTCATACAGTATATGCTGTCTCAAAGACTGAGATGATTCCATTGCCAAATTCTTCAGTTCGGTCTAACCTCATCAATTCTAAAACTGAAAACAGGTACAAGAAGCTCCTATGCACAGTCGACCTTACAAAGGACTTCTTTTTCAGCTACTCATACCATATTATGCGTAGTCTGCAGAGGAACTTTTGTGATAATGAGACAGGCCATGTCCTTTATGAGACCATGTTTGTCTGGAATGAGTTCTTAACTCGAGGAATTAGGAATCACCTCCAGAATACTACTTGGACAGTTGCACTAGTTTATGGCTTTTTTAAACAGGGCACACTAATGATATCTGGACGGGAGTTCATACTTACAATCATTGCGAGACGATCACGTCATTATGCTGGCACTAGGTATTTGAGGCGAGGTGTTAATGAGAAGGGCAGAGTAGCAAATGATGTTGAGACAGAACAAATAGTCTTTGAGGATGTTCAGGAAGGTCTTCCCATCCAAATAAGCTCTATCATCCAGAACCGTGGTTCAATCCCTCTTTTCTGGTCACAGGAAACTTCACGTCTAAACATTAAACCAGATATTATATTGTCAAAGAAGGATCAGAATTATCAAGCCACCAGACTGCACTTTGAAAATCTTGTCAAAAGATACGGGAACCCTATAATAATTTTGAATTTAATAAAGAGCAATGAGAAGAAGCCTCGTGAGTCCATACTTCGTTCAGAGTTTGCTAATGCCATAGATTTCATTAATAAAGATTTGTCTGAGGAAAACAGGCTCAGGTTCCTTCACTGGGATCTGCACAAACATTTTCAGAGCAAAGCTACAGATGTCTTGCAGCTTCTAGGCAAAGTGGCTGCATATGCCTTGACATCAACAGGTTTTTTTTATTGCCAAGTGACATCAACCTTGAGACCAGAAGACGATCTAAAATGGCCACCTTCAGACAATGTTGATAAGGGAAGCTTTTTACCTACCAGTCATGTTGATTATGATAATGAGGATGCTAATAATTTAGAGAGAAAACTGAGTGAAGGAAATGATGTTTCCAATGAAAATCATTTTGTCAAACCACCCAAATTGCAGAGGGGGGTGCTCAGGACCAACTGCATAGACTGCCTAGATCGCACAAATGTTGCACAATATGCATATGGGTTGGCTGCTCTTGGCCACCAGCTCCATGCTCTGGGAGTTATTGACCACCCAAGAATTGACCTTGATGATCCTGTAGCCGATGATTTGATGGGATTTTATGAGCGGATGGGTGACACACTTGCACATCAGTATGGTGGTTCTGCTGCACACAACAAGATATTCTCTGAGAGGAGGGGCCAATGGAGAGCTGCAACTCAGTCTCAGGAGTTTTTCAGGACTCTTCAACGCTATTACAGCAATGCTTACATGGATGCTGAGAAACAATATGCAATCAGTGTATTCTTGGGGCATTTTCAGCCACAACAAGGTAAGCCTGCTCTGTGGGAGTTGGGTTCAGATCAGCAGTATGATACGGGGAGACATGGAGATGACGATGCAAGGTCATTTATGAAAAGATCCTTCTCAGATGGAAACATTCTTCGTGAAAGTTCTACACCTAGGTCAGCTCCAAATGCCAAGCAAGAAAAATTCTCAAACCCAGACCGATCAGAAGAAGGAAGCAAGGCTTTTTGTGAGTCATCACCTGAAATATCTACTACTGAGAGTGAAATTTCATTTTCAAGGTATACTCCCTCAATGCCTCGTAGACAGCTTTTTGGAGAAATGCAAAGAGAAAGTGATCATATTTATTATTCTGAGCATGGGGACTCCTTCAGCTGCTCCAATTTTGTTGACCTGGATTGGCTATCATCTTCAGGAAATTCATGTGAAGAAGAGCCATACGAGAGGTCATCAATTACCAACTCTCCAATTACTGGGCTTTCTTCAGAAAATGTTGTCAATGGAGTGATTGTAGGAGAAGCAACTGCCTCCACTAGTGATTGTGGCGGCTCCAGCCTCAAGGGAAGGGAGCAAACTGAATCAGAGTTATCCTCATACAGTAATGCGCAGTCCAACACTCCAGAGGAATTTGCAGATACTTTTGTACAATGGGTGACTTATGGACAGACACTTTGCCATTGA 2493 0.4212 MENEQPSNSPSACDETRPSPQVCMQKFRLYETRSNFYMIGRDKSRTYWRVLKIDRLDPSELNLREDSTTYTERECSDLLRRIHEGNLSTGGLKFVTTCYGIVGFIKFLGPYYMLLITKRRQIGAICGHTVYAVSKTEMIPLPNSSVRSNLINSKTENRYKKLLCTVDLTKDFFFSYSYHIMRSLQRNFCDNETGHVLYETMFVWNEFLTRGIRNHLQNTTWTVALVYGFFKQGTLMISGREFILTIIARRSRHYAGTRYLRRGVNEKGRVANDVETEQIVFEDVQEGLPIQISSIIQNRGSIPLFWSQETSRLNIKPDIILSKKDQNYQATRLHFENLVKRYGNPIIILNLIKSNEKKPRESILRSEFANAIDFINKDLSEENRLRFLHWDLHKHFQSKATDVLQLLGKVAAYALTSTGFFYCQVTSTLRPEDDLKWPPSDNVDKGSFLPTSHVDYDNEDANNLERKLSEGNDVSNENHFVKPPKLQRGVLRTNCIDCLDRTNVAQYAYGLAALGHQLHALGVIDHPRIDLDDPVADDLMGFYERMGDTLAHQYGGSAAHNKIFSERRGQWRAATQSQEFFRTLQRYYSNAYMDAEKQYAISVFLGHFQPQQGKPALWELGSDQQYDTGRHGDDDARSFMKRSFSDGNILRESSTPRSAPNAKQEKFSNPDRSEEGSKAFCESSPEISTTESEISFSRYTPSMPRRQLFGEMQRESDHIYYSEHGDSFSCSNFVDLDWLSSSGNSCEEEPYERSSITNSPITGLSSENVVNGVIVGEATASTSDCGGSSLKGREQTESELSSYSNAQSNTPEEFADTFVQWVTYGQTLCH* 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g05093 830 MobiDBLite consensus disorder prediction 783 809 - -
Rops2g05093 830 ProSiteProfiles Sac phosphatase domain profile. 163 556 IPR002013 GO:0016791
Rops2g05093 830 MobiDBLite consensus disorder prediction 649 699 - -
Rops2g05093 830 MobiDBLite consensus disorder prediction 682 699 - -
Rops2g05093 830 MobiDBLite consensus disorder prediction 649 666 - -
Rops2g05093 830 Pfam SacI homology domain 99 396 IPR002013 GO:0016791
Rops2g05093 830 PANTHER POLYPHOSPHOINOSITIDE PHOSPHATASE 14 821 IPR043573 GO:0043813|GO:0046856
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g05093 Rops-Chr2 91307657 91320834 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g05093 23 830 Acyl Lipid Metabolism Gene Families AT5G20840 62.044 0.0 1008
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g05093 K22913 - gmx:100810079 1460.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g05093 2 91307657 91320834 Rops10g01297 10 25556452 25575465 ECH
Rops2g05093 2 91307657 91320834 Rops2g05093 2 91307657 91320834 ECH
Rops2g05093 2 91307657 91320834 Rops11g01891 11 30594468 30614953 PCT