Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g05086 ATGGCTGCTTCTTCTTTTAAACTCTTACTTCTTCTCTTAACAATCTTCTTCTCACATGCTTGTGCTGTTAACTCCTCCAATGCTTCCACAACAACATTGCATGAAAACCTCTTTTTCTTAAAATCTTTCTGCAGAACTACCCCATACCCTGAAGCTTGCTTTAACTCATCCAAGTTGTCCATATCAATAGGTATTAGTCCTAACATCATCAACATCCTTCTCCAGTCCCTCCAATTAGCAATTTCTGAAGCTACAAAGCTATCTGTTCTATTCAACAACGCTGGAAACTCAAACATCATAGAGAACAAAAGAGGAGCAGTCCAAGACTGTAGAGAACTCCAACAATCCACCTTGACTTCCCTAAAACGATCATTATCTGGGATTCGTTCCCAAAACTCAAGGAAGTTAGTTGATGCAAGAACCTACCTCAGTGCAGCCCTCACCAACAAGAACACTTGTCTAGAAAGCTTAGATTCTGCTTCTGGGACACTGAAGCCAGTTCTAGTGAATTCTGTGATCAACTCTTACAAGCATGTTAGTAATTCTCTTTCACTGCTCCCTAAGCCTGAGATAAGAGCTCCCAAAGGACGCAAGAACCGGCATTTGATGAGTGCTCCAACGTGGTTGTCAAGCAAAGACATGCACCTCTTGCAAAGTACTAATGAAATGCCTGTGCTTGTTGTAGCTGCAGATGGAACTGGGAATTTTAGCACCATCACTGAAGCCATCAACTTTGCTCCTAATAACAGCTATTATAGGAGGACAATAATCTATATTAAAAAAGGGATATACGAGGAAAATGTGGAAGTCCCTAGTTATAAGACTAATATTGTTCTGCTTGGTGAAGGAAGTGATGTCACTGTCATTACTGGTGGTAGAAGTGTCATTGACGGCTGGACCACTTTCAGATCTGCAACTTTAGCTGTATCTGGTGAAGGCTTTCTGGCACCTACCACTGATTTGTATTCCAACTCTAACGGCTTCAAGAGTTACCTTGGGAGGCCATGGAGGGTCTATTCTCGTACTGTGTACCTTCAGTCCTACATTGATGTCTTTATTGACCCAACGGGGTGGACAAAGTGGTCTGATGATCAAGGCTTGGACACTTTGTATTATGGAGAGTATGCGAATTATGGGCCTGGTTCAGGGACAGATAACCGAGTAAAATGGCTTGGCTACCATTTAATGGATTACAATAGTGCCTATAACTTCACAGTTTCACATTTCATTATTGGTGATGCTTGGCTTGGGTCTACTTCCTTTCCTTATGATAATGGGATTTAA 1284 0.4167 MAASSFKLLLLLLTIFFSHACAVNSSNASTTTLHENLFFLKSFCRTTPYPEACFNSSKLSISIGISPNIINILLQSLQLAISEATKLSVLFNNAGNSNIIENKRGAVQDCRELQQSTLTSLKRSLSGIRSQNSRKLVDARTYLSAALTNKNTCLESLDSASGTLKPVLVNSVINSYKHVSNSLSLLPKPEIRAPKGRKNRHLMSAPTWLSSKDMHLLQSTNEMPVLVVAADGTGNFSTITEAINFAPNNSYYRRTIIYIKKGIYEENVEVPSYKTNIVLLGEGSDVTVITGGRSVIDGWTTFRSATLAVSGEGFLAPTTDLYSNSNGFKSYLGRPWRVYSRTVYLQSYIDVFIDPTGWTKWSDDQGLDTLYYGEYANYGPGSGTDNRVKWLGYHLMDYNSAYNFTVSHFIIGDAWLGSTSFPYDNGI* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g05086 427 CDD PMEI-like_3 42 185 - -
Rops2g05086 427 PANTHER PECTINESTERASE 16 316 - -
Rops2g05086 427 SMART PMEI_2 35 185 IPR006501 GO:0004857
Rops2g05086 427 Pfam Plant invertase/pectin methylesterase inhibitor 39 185 IPR006501 GO:0004857
Rops2g05086 427 Gene3D - 223 318 IPR012334 -
Rops2g05086 427 Gene3D - 319 427 IPR012334 -
Rops2g05086 427 FunFam Pectinesterase 36 188 - -
Rops2g05086 427 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 39 186 IPR035513 -
Rops2g05086 427 Pfam Pectinesterase 226 316 IPR000070 GO:0030599|GO:0042545
Rops2g05086 427 Pfam Pectinesterase 317 413 IPR000070 GO:0030599|GO:0042545
Rops2g05086 427 NCBIfam pectinesterase inhibitor domain 10 185 IPR006501 GO:0004857
Rops2g05086 427 SUPERFAMILY Pectin lyase-like 224 424 IPR011050 -
Rops2g05086 427 Gene3D Invertase/pectin methylesterase inhibitor family protein 38 188 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g05086 Rops-Chr2 91224748 91226696 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g05086 320 427 Carbohydrate Esterase AT2G26440 65.741 2.51e-45 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g05086 - - gmx:100776969 426.402