Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g05085 ATGGCTCTCTTTTCAACAAAACTCACTGCCACATTCATCTTCTTCCTCCTGCTTCTCTGCACTGTCACAGCAGCTTCCCCTGCTGATTTCTCAGGTTCAGCATGCCTCAAAGTTTCTCCAACCCAATTCGTAGACTCAGCGAGAGCAGTCATCCACATTCTCCAACAAGTCACATCCATTTTATCACAGTTCAAAAGCTTCCTCAACTTTCGTCTTTCAAACGCCATTTCTGATTGCCTCGATTTACTTGACACCTCCTCTGACGAACTTTCATGGTCCGTTTCCGCTACCCAGAATCCAACAGGGAAGCATAACAGTACTGGGAACCTAAGTTCTGACTTGAGAACATGGCTAAGTGCTGTACTTGTAAATCCTGAAACATGCATGGAGGGATTTGAAGATTCCGACCTTCTACCCTCAGTTAGCACCACACAAACTTACCTTGGAAGACCCTGGAAGACTTACTCAAGAACCATTTTCATGCAATCTTACATGAGTGACATGATAAGGCCAGAAGGGTGGTTAGAATGGAATGGAAATTTTGCTTTGGACACGTTGTACTATGCTGAGTACATGAACTCTGGACCAGGTGCTGGAGTAACTAACCGAGTGAAATGGCCAGGGTTCCATGCATTGAATGAATCTAGCCAAGCTAGTAACTTCACAGTGTCTCAATTTATTGAGGGGAATCTATGGTTACCTTCCACAGGTATAGCATACACTGCTGGATTGACAGTTTAA 741 0.4426 MALFSTKLTATFIFFLLLLCTVTAASPADFSGSACLKVSPTQFVDSARAVIHILQQVTSILSQFKSFLNFRLSNAISDCLDLLDTSSDELSWSVSATQNPTGKHNSTGNLSSDLRTWLSAVLVNPETCMEGFEDSDLLPSVSTTQTYLGRPWKTYSRTIFMQSYMSDMIRPEGWLEWNGNFALDTLYYAEYMNSGPGAGVTNRVKWPGFHALNESSQASNFTVSQFIEGNLWLPSTGIAYTAGLTV* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g05085 246 Gene3D - 130 246 IPR012334 -
Rops2g05085 246 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 54 140 IPR035513 -
Rops2g05085 246 CDD PMEI-like_4 11 134 - -
Rops2g05085 246 Pfam Pectinesterase 134 230 IPR000070 GO:0030599|GO:0042545
Rops2g05085 246 SUPERFAMILY Pectin lyase-like 133 243 IPR011050 -
Rops2g05085 246 Pfam Plant invertase/pectin methylesterase inhibitor 36 141 IPR006501 GO:0004857
Rops2g05085 246 PANTHER PECTINESTERASE 22 137 - -
Rops2g05085 246 SMART PMEI_2 26 165 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g05085 Rops-Chr2 91209192 91212955 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g05085 134 244 Carbohydrate Esterase AT3G43270 74.775 4.22e-58 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g05085 K01051 - gmx:100814987 213.386