Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g05083 ATGGCAGTAACTTTCAAAGGGTGTTACTCCGTGAGGCCCATGGAGCCAACATGGAGCGGTCGTTTAGCTTTATCTGAATGGGATCAAATAGGCATCATAACTCACTCGCCAACAATCTACTTCTACCGTCCCTCACAAAACTGGGACTTCGGCACCATTGCCAGCACCTTGCAAGAGTCCTTAAGCAGAGTCCTTGTGCCGTTTTATCCACTTGCCGGCCGTTTACAATGGATAGGCAATGGTCGTTTTGAGCTGAAGTGCAATGCCATGGGAGTTCACTTCATTGAAGCTGAGTCCTCATTAACTTTAGATGATCTTGGTGACTTTTCACCCTCTTCTGATTACCATGATCTTGACCTTGTCGCAGTTGTAGACTATACCCTCCCACTTAATGAGATACCCTTGTTTTTAGTTCAGCTCACGATGTTCAAGTGTGGTGGCATCAGCATAAGCATCAAAATCTCTCATGCGGTTGCGGATGGATCAAGTTCCTTACACTTCATTTCTGAATGGGCAAGGCTTGCAAGAGGTGAGCCCTTGCAAACGACGCCGTTTCTTGATCGAAAAGTGTTGCGAGCAGGAGAAGCTCCTTTGGTGCAGCATAGTCAGTGGGAGGAGTTCAATCTTCCTCCCTCGTTACTCGGCCAATCAGAGGAAAAGAAGAAGAAGAAAACCACTGTGGCTATCATCAAACTGAGCAAAACCCAAGTTGAGAAATTGAGAAAAATAGCAAATGAAAGTTATACACGGTATGAGACTGTAGCTGGGCACATATGGAGAAGTGCATGCAAGGCAAGAGGGCACAAACAGGAACAACCAACCGCACTGGGTGTTTGTGTTGATTGGAGGAGTCGCATGCAGCCTCCGTTGCCAAAAGGGTATTTTGGGAATGCCATTTTGGAGGTGGTTGCTACAAGTCTTGCAGGTGATTTGATGTCAAAGCCATTGGGGTATGCGTCGAGTAGAATAAGGGAAGCGATTGAGAAGGTGACTGATGAGTATGTGAGGTCAGGGATTGAGTTCTTTAAGAAGCAGGAGGATTTGAGTAAGTTTCAAGATCTTCACGCGACAGGGAATGACAAGTGGCTTTTCTCCTATGAGAACCCAAATCTGGGGGTGGTTAGTTGGTTGACGTTACCCGTCTATGGGCTTGATTTTGGGTGGGGGAAGGAGGTTTACATGGGTCCCGTGTCACTGGACTTTGATGGAGATTCTTTTCTTCTTCCCACTCCAGATGATGGGGATGGATCTCTGCTCCTTGCTATTTGTCTGGAAGAGGTTCATATGGATGCGTTTAAAAAGCATATTTATGAAGACATTATGTAA 1326 0.4608 MAVTFKGCYSVRPMEPTWSGRLALSEWDQIGIITHSPTIYFYRPSQNWDFGTIASTLQESLSRVLVPFYPLAGRLQWIGNGRFELKCNAMGVHFIEAESSLTLDDLGDFSPSSDYHDLDLVAVVDYTLPLNEIPLFLVQLTMFKCGGISISIKISHAVADGSSSLHFISEWARLARGEPLQTTPFLDRKVLRAGEAPLVQHSQWEEFNLPPSLLGQSEEKKKKKTTVAIIKLSKTQVEKLRKIANESYTRYETVAGHIWRSACKARGHKQEQPTALGVCVDWRSRMQPPLPKGYFGNAILEVVATSLAGDLMSKPLGYASSRIREAIEKVTDEYVRSGIEFFKKQEDLSKFQDLHATGNDKWLFSYENPNLGVVSWLTLPVYGLDFGWGKEVYMGPVSLDFDGDSFLLPTPDDGDGSLLLAICLEEVHMDAFKKHIYEDIM* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g05083 441 Gene3D - 214 439 IPR023213 -
Rops2g05083 441 Pfam Transferase family 1 438 - -
Rops2g05083 441 FunFam Tryptamine hydroxycinnamoyl transferase 213 437 - -
Rops2g05083 441 Gene3D - 1 208 IPR023213 -
Rops2g05083 441 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 11 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g05083 Rops-Chr2 91152520 91153845 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g05083 1 438 Monolignol Biosynthesis Gene Families AT5G48930 39.551 8.78e-113 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g05083 K13065 - gmx:100777007 614.379