Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g05075 ATGGCTGGTTTGAACCCCGAGGCTGAGTTTTTTGCTGGAGGAGGAAGAGAAGGATGGAAAGCTTCTCCTCCTGTTCCTTCTTCTGGTGATAGTGTTGGCAGTGTTGATGGAAGAAGTGACAAAGTCAGTGATGAAGGGTCGGTGAAGCATTCCTCATCTAACTGGCCAATGCCAACATCTGGACTGAATGCAAAGACTCCTGGTAGAACTAAGTTTGCCATCTTCTATAAGGGGAGTATTTGTGTCTATGATGGAATTGCTGCAGAAAAGGTGCGTGAAATAATGTCAATTGCTGCTGCTGCCGCCAAGTCTGCTGAAATGAAGAGTGGGATTCCCTTCCCTTCACTCATTCCCACAAGCCCTTCTTCTCCTCAAGGAACCTCTAATAATTTGGCTTCTCCACAGTCAGTGTGCTTTCCTGATGAGAAGAGTTCCATTTGCAGGCTGCAAGAATTTCCAATAGCACGCAGACAGTCACTTCAAAGGTTTCTTGAGAAGCGACGAATCAGGTTGGGTAGCAAAGCCCCTTATGCGTCCCCAACAGCAAGAGCAGGTGACAACATAGAAAACAACTTCTGTGCTAAGAATTCACCAGATTTTTCTTCCTTGAATGATCAGAAGAGGGATTTCAGCCCAGTATTATTGTCCCTTGAGGGCATCTAG 663 0.46 MAGLNPEAEFFAGGGREGWKASPPVPSSGDSVGSVDGRSDKVSDEGSVKHSSSNWPMPTSGLNAKTPGRTKFAIFYKGSICVYDGIAAEKVREIMSIAAAAAKSAEMKSGIPFPSLIPTSPSSPQGTSNNLASPQSVCFPDEKSSICRLQEFPIARRQSLQRFLEKRRIRLGSKAPYASPTARAGDNIENNFCAKNSPDFSSLNDQKRDFSPVLLSLEGI* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g05075 220 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 54 183 IPR040390 -
Rops2g05075 220 MobiDBLite consensus disorder prediction 120 134 - -
Rops2g05075 220 ProSiteProfiles Tify domain profile. 65 100 IPR010399 -
Rops2g05075 220 MobiDBLite consensus disorder prediction 115 134 - -
Rops2g05075 220 MobiDBLite consensus disorder prediction 48 63 - -
Rops2g05075 220 Pfam tify domain 67 99 IPR010399 -
Rops2g05075 220 SMART tify_2 65 100 IPR010399 -
Rops2g05075 220 Pfam Jas motif 153 177 IPR018467 -
Rops2g05075 220 MobiDBLite consensus disorder prediction 13 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g05075 Rops-Chr2 91064501 91068235 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g05075 29 177 Tify Gene Family AT5G20900 39.073 2.13e-21 85.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Rops2g05075 tify 8.9e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g05075 K13464 - gmx:100306655 181.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g05075 2 91064501 91068235 Rops11g01920 11 31009311 31014278 PCT