Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g05071 ATGGAAGCACATATGGGAGGTTTATCTAAGCTAACACACCTCATTACTCTGCTGTTGGTACTACTAGGATTGTGGACCCGTGTTGTTGAAGGCACCAAACATGTAAGCATCAAGAACAAACTAGGATCTGGGAAGAACATGTCCTTACATTGCCAATCCAAAGACAATGATCTGGGCAATCAGAACATAGCATATGGGGATGAATTTGGCTGGGACTTCTCTGACGATGTTACTGGAACTACACTATTTTTCTGTGATTTGGCATGGGAGAGAGTTCAGGAGTATCATTTTGATGCGTATTTCTTTGGCAGGGACTACGTACGATGTAACACTGGATGTTCATGGATTGTATCGGCTGAAGGCATTTATGGCTTAAATGGACAAACAGGGTTCTGGGAATTCATATACAATTGGCCAAACTGA 423 0.4232 MEAHMGGLSKLTHLITLLLVLLGLWTRVVEGTKHVSIKNKLGSGKNMSLHCQSKDNDLGNQNIAYGDEFGWDFSDDVTGTTLFFCDLAWERVQEYHFDAYFFGRDYVRCNTGCSWIVSAEGIYGLNGQTGFWEFIYNWPN* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g05071 140 Pfam Plant self-incompatibility protein S1 34 138 IPR010264 -
Rops2g05071 140 PANTHER - 30 126 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g05071 Rops-Chr2 90896466 90896888 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g05071 35 138 Carbohydrate Esterase AT3G16970 34.259 5.29e-13 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g05071 - - gmx:102670225 218.394