Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g05064 ATGTGCCAAACAAGGAAGAGTTCCAGAGGCATGGAGCTGTTATGGGTGTTTGGGTTTATGGGCTTGGTGATTGTGAAATGGGTGGAAGGCTTTGAGAATGCTAATGTGACAGACATGCAATATGTCAATGGAAGAGGTTTCAACAACAGACCTTTGTTTGTTGGTCTTACTCTTATTAATGGTGCTGCTGCTAAAGGAGCTGTCTGCCTGGATGGATCTTTACCAGGTTACCATCTCCACCGTGGATATGGTTCAGGTTCAAACAGTTGGCTCATACAATTGGAGGGAGGAGGCTGGTGTGGAACTATCAGAAATTGTGTTTACAGTAAGAGAACACGTCATGGTTCATCAGTATATATGGAAAAACAAATACCATTTATTGGGATACTGAGCAACAAAGCTGAGGAAAATCCAGATTTTTTCAATTGGAATAGAGTGAAAATTCGTTATTGTGATGGTGCATCATTTAGTGGGGACAGTCAAATTCAGGCAGCAGGGTTGTATTTCAGAGGGCAACGCATATGGCAAGCTGCTATGGAAGATTTAATGTCAAAAGGGATGTGCTATGCCAAGCAGGCTCTTCAATCTGGATGCTCTGCAGGAGGCTTAGCATCTATACTACATTGTGATGAATTTCGGGAAATGTTTCCTAGAACCACAAGAGTAAAGTGCTTAAGTGATGCTGGATTATTCCTTGATGTTGTTGATGTATCTGGCCGTCGCAGTTTAAGGAATATGTTCGGAGGTGTGGCCACCTTACAGGGAGTGCACAAAACCCTTCCAAGGAGTTGTACTAGTCACCGCAATCCAATTTCGTGCTTTTTCCCTCAGCACTTAATTGCCAGTGTTAGGACACCACTATTTCTTCTCAATGCAGCTTATGATACTTGGCAGATTCAAGCCAGTCTAGCTCCACCATCTGCTGACTATCATTGGAATTGGAACGAATGCAGAAAAAATTATGCACGTTGCAGTGCACCACAGATACAGTATCTTCAAGGTTTTCGAAATCAAATGCTTAGAGCTACAAGAGGCTTCTCAAGGTCTCGTCAAAATGGGTTATTCATAAATTCATGTTTTGCTCATTGCCAATCTGAAAGAAAGGATACATGGTTTGCTCGTGGTTCCCCTCATATTGGAAACAAAGGGATTGCAGAGTCTGTTGGGAACTGGTTTTTTGACCGAGTTGGTGTCCAGGCTATTGGTTGTGCTTACCCTTGTGACAAAACCTGTCATAATTTGGTTTTTAAGTGA 1254 0.4242 MCQTRKSSRGMELLWVFGFMGLVIVKWVEGFENANVTDMQYVNGRGFNNRPLFVGLTLINGAAAKGAVCLDGSLPGYHLHRGYGSGSNSWLIQLEGGGWCGTIRNCVYSKRTRHGSSVYMEKQIPFIGILSNKAEENPDFFNWNRVKIRYCDGASFSGDSQIQAAGLYFRGQRIWQAAMEDLMSKGMCYAKQALQSGCSAGGLASILHCDEFREMFPRTTRVKCLSDAGLFLDVVDVSGRRSLRNMFGGVATLQGVHKTLPRSCTSHRNPISCFFPQHLIASVRTPLFLLNAAYDTWQIQASLAPPSADYHWNWNECRKNYARCSAPQIQYLQGFRNQMLRATRGFSRSRQNGLFINSCFAHCQSERKDTWFARGSPHIGNKGIAESVGNWFFDRVGVQAIGCAYPCDKTCHNLVFK* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g05064 417 Pfam Pectinacetylesterase 51 395 IPR004963 GO:0016787
Rops2g05064 417 PANTHER NOTUM-RELATED 53 413 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g05064 Rops-Chr2 90802624 90810157 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g05064 53 417 Carbohydrate Esterase AT1G57590 70.137 0.0 553
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g05064 K19882 - gmx:100791571 761.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g05064 2 90802624 90810157 Rops2g05064 2 90802624 90810157 ECH
Rops2g05064 2 90802624 90810157 Rops8g03859 8 79427869 79432583 ECH
Rops2g05064 2 90802624 90810157 Rops6g02011 6 37944273 37949454 ECH