Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g05043 ATGGTGATTTTGAACCTTGGGAAGAAGAATAAGAGTGAGAGGGAGGGAATGCGACTTGGGAAATATGAGTTGGGTAGGACTCTTGGTGAAGGTAATTTTGGTAAAGTCAAGTTTGCAAGGAACATTGATTCTGGAGAATCTTTTGCTATTAAGATCATTGACAAGAACAGGATCATTGATCTCAATATTACCTATCAGATAAAGAGGGAAATAGCTGCTTTAAAGCTTCTCAGGCATCCGAATGTAGTTAAATTATATGAGGTCTTGGCTAGCAAAACAAAAATTTATATGGTACTTGAGTACGTGACTGGAGAGGAGTTATTTCATAAAATTGCATCCAAAGGTAAACTTAAAGAATGTGAAGGTAGAAAGCTGTTCCAACAGTTGATTGATGGTGTGAGTTACTGCCACACTAAAGGTGTCCTCCACAGGGATCTCAAGCTTGAGAATGTACTTGTGGATGTCAAAGGGAATATAAAGATAACCGATTTTGGCCTTAGTGCTTTACCCCAACAAGTTAGGGCAGATGGATTACTGCATACAACTTGTGGAAGTCCTAATTATGTTGCACCAGAGATTCTTGCTAATAGGGGCTATAATGGTGCAACATCAGATGCATGGTCATGCGGTGTTATCTTGTTTGTAATCCTCACAGGTTTCCTACCTTTTGATGATAGAAATCTTGTAGTTCTCTATCAAAAGATTTCTAAAGGAGATGTTCAGATACCAAAATGGCTATCACCTGGTGCAAAAAACATGATAAAGAGGATTCTTGATCCCAACCCTGAAACCCGGATAACAATCGCTGGGATCAAAGAAGATCCATGGTTCAAGCAGGGCTATACTCCAGCAGATCCTGAGGATGAGGAAGAGGATGTATATATTGATGATGAAGCCTTTTCCATCCATGAATTGCCACATGAAGAGGAACAGAGGAGTCCAGGATCAGCAACCCCTATCAATGCATTCCAGTTGATAGGGATGTCTTCATGCCTAGACCTCTCTGGCTTTTTTGAGAAAGAGGATGTCTCTGAGAGGAAGATAAGATTCACATCAAATCTTTCAGCTACAGATCTGATGGGGAGGATTGAGGACACTGTGACAGAAATGGGATTTAGAGTCCATAAGAAAAATGGCAAATTGAAAGTGATACAAGAGAACAAGGAGCACAAAACTCTAGGCAGCCTCTCAGTGACAGTAGAGGTGTTTGAAATAAGCCCTTCATTGTATGTAGTAGAATTGAGGAAGTCTTATGGAGATGCCTCTGTATATAGACAGTTATCAAAGAAGTTAGTGAATGATTTGGGTGTTCCCCCAAGGCAAGCGCTAGCAGATGGATTGCTGCATACAACTTGTGGAAGTCCCAATTATGTTGCACCAGAGATCCTTGCTAATAGGGGCCATAACGGTGCAACATCAGATACATGGTCATGCGGTGTTATCTTGTTTGTAATCCTAAATGGATACCTACCTTTTGATGATAGAAATCTTGCAGTTCTCTATCAAAAGATTTCTAAAGGAGATGTTCAGATACCAAAATGGCTATCACCTGGTGCAAAAAACATGATAAAGAGGATTCTTGATCCCAACCCTGAAACCCGGATAACAATGGCTGGGATCAAAGAAGATCCATGGTTCAAGCAGGGCTATACTCCTGCATATCCTGAGGATGTATATATTGATGATGAAGCCTTTTCCATCCATGAATTGCCACATGAAGAGGAACAGAGGAGTCCAGGATCACCAACCCATATCAATGCATTCCAGTTGATAGGGATGTCTTCATGCCTAGACCTCTCTGGCTTTTTTGAGAAGGAGGATGTCTCTGAGAGGAAGATAAGATTCACATCAAATCTTTCAGCTACAGATCTGATGGGGAGGATTGAGGACACCGTGACAGAAATGGGATTTAGAGACCAGAGGAAAAATGGCAAAGTGTTTGAAATAAGCCCTTCATTGTATGTAGTAGAATTGAGGAAGTCTTATGGAGATGCCTCTGTATATAGACAGTTATCAAAGAAGTTAGTGAATGATTTGGGTGTTCCCCCAAGGCAAGCGCTAGTGAGCTCAGAAGTGAAATAG 2082 0.4097 MVILNLGKKNKSEREGMRLGKYELGRTLGEGNFGKVKFARNIDSGESFAIKIIDKNRIIDLNITYQIKREIAALKLLRHPNVVKLYEVLASKTKIYMVLEYVTGEELFHKIASKGKLKECEGRKLFQQLIDGVSYCHTKGVLHRDLKLENVLVDVKGNIKITDFGLSALPQQVRADGLLHTTCGSPNYVAPEILANRGYNGATSDAWSCGVILFVILTGFLPFDDRNLVVLYQKISKGDVQIPKWLSPGAKNMIKRILDPNPETRITIAGIKEDPWFKQGYTPADPEDEEEDVYIDDEAFSIHELPHEEEQRSPGSATPINAFQLIGMSSCLDLSGFFEKEDVSERKIRFTSNLSATDLMGRIEDTVTEMGFRVHKKNGKLKVIQENKEHKTLGSLSVTVEVFEISPSLYVVELRKSYGDASVYRQLSKKLVNDLGVPPRQALADGLLHTTCGSPNYVAPEILANRGHNGATSDTWSCGVILFVILNGYLPFDDRNLAVLYQKISKGDVQIPKWLSPGAKNMIKRILDPNPETRITMAGIKEDPWFKQGYTPAYPEDVYIDDEAFSIHELPHEEEQRSPGSPTHINAFQLIGMSSCLDLSGFFEKEDVSERKIRFTSNLSATDLMGRIEDTVTEMGFRDQRKNGKVFEISPSLYVVELRKSYGDASVYRQLSKKLVNDLGVPPRQALVSSEVK* 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g05043 693 Gene3D Transferase(Phosphotransferase) domain 1 14 320 - -
Rops2g05043 693 Gene3D Transferase(Phosphotransferase) domain 1 434 584 - -
Rops2g05043 693 CDD CIPK_C 321 432 - -
Rops2g05043 693 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 10 422 - -
Rops2g05043 693 ProSitePatterns Protein kinases ATP-binding region signature. 28 51 IPR017441 GO:0005524
Rops2g05043 693 ProSiteProfiles NAF domain profile. 580 604 IPR018451 GO:0007165
Rops2g05043 693 Pfam NAF domain 319 376 IPR004041 GO:0007165
Rops2g05043 693 Pfam NAF domain 582 638 IPR004041 GO:0007165
Rops2g05043 693 CDD CIPK_C 586 676 - -
Rops2g05043 693 Gene3D Kinase associated domain 1, KA1 321 433 - -
Rops2g05043 693 SMART serkin_6 22 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g05043 693 FunFam Non-specific serine/threonine protein kinase 15 317 - -
Rops2g05043 693 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672|GO:0006468
Rops2g05043 693 FunFam Non-specific serine/threonine protein kinase 13 101 - -
Rops2g05043 693 ProSiteProfiles NAF domain profile. 315 339 IPR018451 GO:0007165
Rops2g05043 693 Gene3D Kinase associated domain 1, KA1 585 680 - -
Rops2g05043 693 FunFam Non-specific serine/threonine protein kinase 317 438 - -
Rops2g05043 693 SUPERFAMILY Protein kinase-like (PK-like) 19 314 IPR011009 -
Rops2g05043 693 ProSiteProfiles Protein kinase domain profile. 271 546 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g05043 693 Pfam Protein kinase domain 22 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g05043 693 Pfam Protein kinase domain 447 546 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g05043 693 SUPERFAMILY Protein kinase-like (PK-like) 444 559 IPR011009 -
Rops2g05043 693 ProSiteProfiles Protein kinase domain profile. 22 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g05043 Rops-Chr2 90475614 90488965 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g05043 432 689 CBL-interacting serine-threonine protein kinases AT3G17510 61.324 2.86e-106 326
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Rops2g05043 Pkinase 9.9e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g05043 K07198 - gmx:100777468 730.324