Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g05038 ATGTGCCTCTTGTGTTCTTCTCCAATTCCCTCTTACAACTACTGCACAACAGGGTTGGTTGTGAACAGATTTATTGACAGCAGCAAAATGGCATCTGATCTGAATTCAGGGTTGTCCAAGAAAACGTCTGTTTTTGGGTTGAAAGCATGGGAATTAATGGGGATAATAGTTGGTTTGTTCATTGTAATCATTCTCGTGGTGCTATCAATATGTCTTACTTTAAGAAAGAAATCCAGAAGAGTCAATGGCATGCTTCCTCTTAGCCAAATGTTATCTGTTTCAGAAGAGATCAAAGAGATTAGAGTTGATCAAATTTCATCTAATAATCATCCCCAGAATGGTGCTTTTGTGAGTCTGTATGACAAGTTTAGTGACAAGGAGTCTGAAAAGGTTTTGATCCCAACGAAGAATGGGGAAAATAGCAGTCAATCAGGCTCATTTATTACTGTTGAGAAAGATGCTGGTGGTTCACAATCAGGTGAAGAAAGTGGTGCTATGTCTGTTTCTGTCTACAGGTCTTCTTCTCATCCTATATCTGCACCATCTCCATTGTCTGGTCTTCCTGATTTCTCTCACCTTGGCTGGGGGCACTGGTTTACATTGAGGGACCTAGAACTTGCAACAAACAGGTTTTCGAAAGACAATGTTATTGGTGAAGGTGGATATGGAGTTGTTTATCAAGGCAAGCTAACCAACGGGAGTCCTGTGGCTGTTAAGAAGCTGCTCAATAATCTAGGACAAGCTGAAAAGGAATTTAGAGTGGAAGTTGAGGCTATTGGTCATGTGCGGCACAAGAACTTGGTTAGACTTTTGGGCTATTGCATTGAAGGCACTCACAGGTTGTTGGTCTATGAGTATGTTAATAATGGCAACTTAGAGCAATGGCTTCATGGAGCCATGCGGCAGTATGGTTTTCTTACGTGGGATGCTCGGATTAAAATTCTTCTTGGAACAGCTAAAGCGCTGGCTTACTTGCATGAGGCAATCGAACCAAAAGTTGTCCATCGAGATATCAAGTCAAGCAACATTCTAATTGATGATGACTTCAATGCTAAAATATCTGACTTTGGGCTGGCTAAGTTACTGGGTGCTGGAAAAAGTCATATTACAACTCGAGTGATGGGTACTTTTGGATATGTGGCTCCAGAATATGCAAACTCTGGCTTACTAAATGAAAAGAGTGATGTATATAGTTTTGGGGTATTGCTACTTGAAGCAATTACTGGAAGAGATCCAGTGGATTATGGCCGACTGGCAGCTGAGGTAAATTTGGTTGACTGGCTCAAGATGATGGTAGGGAATAGGCGTGCAGAAGAGGTGGTGGACCCTAACATTGAAACCAGGCCATCAACAAGTGCCCTTAAACGAGCCCTTTTGACTGCTTTGAGGTGTGTTGATCCAGATGCTGAAAAAAGACCAAAGATGAGTCAAGTTGTCCGCATGCTTGAATCAGAAGAATATCCCATACCTCGAGAGGATCGAAGACGCAGAAAGAGTCAGGCCGGGAATATTGAGGTTGAGGCCCATAAGGAGACTCCTGACACTGAGAAGAGTGATAATCCAGATTCCAAGTCCAATGGCACAAGGAAACAACACAAGTAG 1602 0.4245 MCLLCSSPIPSYNYCTTGLVVNRFIDSSKMASDLNSGLSKKTSVFGLKAWELMGIIVGLFIVIILVVLSICLTLRKKSRRVNGMLPLSQMLSVSEEIKEIRVDQISSNNHPQNGAFVSLYDKFSDKESEKVLIPTKNGENSSQSGSFITVEKDAGGSQSGEESGAMSVSVYRSSSHPISAPSPLSGLPDFSHLGWGHWFTLRDLELATNRFSKDNVIGEGGYGVVYQGKLTNGSPVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGTHRLLVYEYVNNGNLEQWLHGAMRQYGFLTWDARIKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDDFNAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVLLLEAITGRDPVDYGRLAAEVNLVDWLKMMVGNRRAEEVVDPNIETRPSTSALKRALLTALRCVDPDAEKRPKMSQVVRMLESEEYPIPREDRRRRKSQAGNIEVEAHKETPDTEKSDNPDSKSNGTRKQHK* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g05038 533 FunFam Putative receptor-like serine/threonine-protein kinase 287 498 - -
Rops2g05038 533 Gene3D Phosphorylase Kinase; domain 1 194 286 - -
Rops2g05038 533 ProSiteProfiles Protein kinase domain profile. 211 488 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g05038 533 ProSitePatterns Protein kinases ATP-binding region signature. 217 240 IPR017441 GO:0005524
Rops2g05038 533 FunFam Putative receptor-like protein kinase 193 286 - -
Rops2g05038 533 SMART serkin_6 211 482 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g05038 533 PANTHER OS01G0323000 PROTEIN 33 507 - -
Rops2g05038 533 CDD STKc_IRAK 217 483 - -
Rops2g05038 533 MobiDBLite consensus disorder prediction 472 533 - -
Rops2g05038 533 ProSitePatterns Serine/Threonine protein kinases active-site signature. 333 345 IPR008271 GO:0004672|GO:0006468
Rops2g05038 533 Gene3D Transferase(Phosphotransferase) domain 1 287 499 - -
Rops2g05038 533 Pfam Protein kinase domain 212 480 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g05038 533 SUPERFAMILY Protein kinase-like (PK-like) 195 490 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g05038 Rops-Chr2 90399774 90403891 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g05038 46 485 Trihelix Transcription Factor Family AT1G70460 40.899 1.82e-94 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Rops2g05038 Pkinase 2.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g05038 - - gmx:100793499 894.804