Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g05037 ATGTTCGAGGAGGCTGGACTGATGTTACTTCAAGAAGGAGGAAGAAAGGTAATATCATTGGTGCGAACACTGCCCTTGTTAAAGCTGGGCCATAATATTTGTGGCCAACATTGTGGCAACCGTAGTGCCTTGTTGGAGCCCACATGTCTTTGTACAGCACACGAAGACCCATTTGATTTTTCGGAAGAGCCAAATGCCAACCCTGTAGACTCAGCGTTAATTGGGCCCAAAGAAGCGGGGCCCATAGTGGAAACGGATACTATATGGGAGAAAATCCGTGAGAATGTGGTTTCCTTTAATCATGGAGATAATGGCACTGACCTTTTGGGAGATAGAATAAATGAAATTCATCCAGAGGAGAGTGCCTTGGTAAGCTCAGTGTGGAATCAACCGGGTTTTTTAATTAAAGTTATGAAGGGAGGAAAGGGGAATGCTCTTAAGAGTAATCTACGAGGAAGGAGTTTGGGACCAGACTTGGCTACATCAAAGCAGAGAGTTCGGATGCGAAGCGCCGAAGATGTATGGCTCTGGAAATCAGCTAAGAAGAGGGACATTTCTATCAATTCAATTTATGATGCTCTCATACCTAATACTCACAGGGTGGAAATAGATCAAGCTACCCGACAAGGGCCTATGGCTCAGCCTACTTCAAGCCAGGCTAGACCGGGTCATTCTAACGCTTCTTCAATAATTCAAATTGCAAAGGCTTTAAGCATAGAAAAGGCGTCACAAGAAACACAAACACTGTTATCTCTGAGTTTTTCTGAAAAAGAGCTGAGGATCATGGGTTGCTTCGGCCTTTGCAAAGGAAATGATGCTTATACAACTGCTGACAAGGGACCCTTCATGCAAAGCTATCCTACCGGGAACACCAGTTATCATGGCAGACCCACTCCAATAACCACTCCTCGGACCATAAATTTTCAACCTATTGCTGTCCCTTCCCTTACAGTAGATGAATTGAAGTCTTTGACAGATAATTTTGGCTCAAAATCTTTCATTGGTGAGGGTGCATATGGGAAAGTATATCATGCCACATTGAAAAATGGGCGTGAAGTGGTAATTAAGAAGTTAGATTCCAGTAACCAGCCAGACCAGGAATTTCTTTCTCAGGTCTCCATCGTATCAAGGCTAAAGCATGAAAATGTTGTTGAGCTTGTTAGTTATTGCGTTGATGGTCCTCTACGTGCCCTTGCCTATGAGTATGCTCCAAAAGGATCCCTTCATGATTTTCTACATGGACGCAAAGGTGTCAAGGGTGCACAACCTGGTCCAGTTCTCTCCTGGGCTCAGAGAGTTAAAATTGCTGTTGGAGCAGCCAGAGGACTTGAATATCTTCATGAAAAGGCAGAGACTCATATCATCCATCGTTACATTAAGTCTAGCAACATAATGCTTTTTGACGATGATGTTGCAAAGATTGCTGATTTTGATTTGTCAAATCAAGCCCCTGATGCAGCAGCACGTCTTCATTCTACCCGTGTTCTTGGAACCTTTGGTTATCATGCTCCAGAATTTGCAATGACTGGGCAGCTCACTGCAAAAAGTGATGTTTACAGTTTTGGAGTTATACTGCTGGAACTCTTAACTGGGCGTAAACCTGTTGATCATACACTACCCCGAGGACAGCAAAGCCTTGTGACCTGGGCAACACCAAAGCTAAGTGAAGATAAGGTGAAGCAGTGTGTTGATGTTAGATTAAAGGGAGAGTACCCTTCAAAGTCAGTTGCAAAGATGGCTGCTGTTGCTGCATTGTGTGTGCAATATGAAGCTGAGTTTCGGCCAAATATGAGCATCATAGTCAAAGCTCTACAGCCTCTACTAAATACTCGTCCAAAGGAAGCACGGAACATGTAA 1857 0.4378 MFEEAGLMLLQEGGRKVISLVRTLPLLKLGHNICGQHCGNRSALLEPTCLCTAHEDPFDFSEEPNANPVDSALIGPKEAGPIVETDTIWEKIRENVVSFNHGDNGTDLLGDRINEIHPEESALVSSVWNQPGFLIKVMKGGKGNALKSNLRGRSLGPDLATSKQRVRMRSAEDVWLWKSAKKRDISINSIYDALIPNTHRVEIDQATRQGPMAQPTSSQARPGHSNASSIIQIAKALSIEKASQETQTLLSLSFSEKELRIMGCFGLCKGNDAYTTADKGPFMQSYPTGNTSYHGRPTPITTPRTINFQPIAVPSLTVDELKSLTDNFGSKSFIGEGAYGKVYHATLKNGREVVIKKLDSSNQPDQEFLSQVSIVSRLKHENVVELVSYCVDGPLRALAYEYAPKGSLHDFLHGRKGVKGAQPGPVLSWAQRVKIAVGAARGLEYLHEKAETHIIHRYIKSSNIMLFDDDVAKIADFDLSNQAPDAAARLHSTRVLGTFGYHAPEFAMTGQLTAKSDVYSFGVILLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVKQCVDVRLKGEYPSKSVAKMAAVAALCVQYEAEFRPNMSIIVKALQPLLNTRPKEARNM* 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g05037 618 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 283 612 - -
Rops2g05037 618 Gene3D Phosphorylase Kinase; domain 1 300 402 - -
Rops2g05037 618 ProSiteProfiles Protein kinase domain profile. 328 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g05037 618 FunFam pto-interacting protein 1 404 615 - -
Rops2g05037 618 CDD STKc_IRAK 334 607 - -
Rops2g05037 618 Gene3D Transferase(Phosphotransferase) domain 1 404 617 - -
Rops2g05037 618 Pfam Protein tyrosine and serine/threonine kinase 333 604 IPR001245 GO:0004672|GO:0006468
Rops2g05037 618 ProSitePatterns Protein kinases ATP-binding region signature. 334 357 IPR017441 GO:0005524
Rops2g05037 618 SUPERFAMILY Protein kinase-like (PK-like) 303 604 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g05037 Rops-Chr2 90364528 90393882 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g05037 309 617 Receptor kinase-like Gene Family AT4G02010 47.368 3.42e-85 279
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Rops2g05037 PK_Tyr_Ser-Thr 6.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g05037 K13436 - gmx:547596 644.039