Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g05034 ATGGCTGAGTTGCTAAGCAAACCACGATCCACTACTGCTGGCAGGTGCCCAACCTCGGTCTACCAAAACTCTCTCAGTCAGGAGGAGAGTGGAAGCGGCACCAAAGATGCAGATGACAAAAAGGTGGTTGATGTTACCAAGCTTGGAGCTGTGGAAAAGCGTTTATTCATTGACAGGCTCATAAAACACATTGAGAATGATAACCTCCAACTGCTGAAGAGACTTAGAGATAGGATGGACAGAGTCAATGTGAAGTTACCTACTGTGGAGGTCAAGTACAAGAACCTGCATGTAGAAGCCGAATGTGAGGTTGTTCAAGGGAAGGCACTACCTACTCTATGGAACTCTTTTTCTAGCTTCCTTTCAGGTTTCATGAAAACTATATCGTGTAGTTCTCAAGGAGCTAAGATGAGCATTCTGAATGATGTCAGTGGCATCATAAAGCCATCAAGGCTTACTCTTCTTCTTGGTCCACCTGGTTGTGGGAAAACAACCTTGTTAATGGCACTGGCTGGAAAACTAGAACAATCTCTCAAGGCTTCTGGAGAAATCTCTTACAATGGTTACAATCTAGATCAATTTGTTCCTCAAAAAACATCAGCTTACATAAGCCAGTATGACCTGCACGTTCCTGAGATGACAGTGAGAGAAACAATTGACTTTTCAGCACAATGTCAGGGTGTTGGAAGTAGAGCTGACATAGTGGCTGAAATTTCCCAGAGAGAAAAAGAAGAAGGAATCATCCCTGACCCAGATATTGATACCTATATGAAGGCAATTTCAGTTGAAGGACAAAGTGAAAATCTTCAAACAGAATATGTTTTAAAGATTCTCGGACTGGATATCTGTGCGGACATACTGGTTGGTGATGCACTGGATAGAGGCATTTCAGGTGGCCAGAAGAAAAGACTAACTACAGGAGAGATGATTGTTGGTCCCATAAAAGCTCTTTTTATGGATGAAATATCAACTGGTTTGGACAGCTCAACAACCTTCCAAATAGTTACATGTCTCCAGCAATTGGTGCACATCACAGATGCAACTGCAGTGCTTTCACTCCTTCAACCAGCACCAGAAACCTTTGAGTTATTTGATGATCTTATATTGATGGCAGAGGGCAAGATAGTGTACCATGGCCCCCGCAGTCAAGCACTCCAATTTTTTAAGGATTGTGGTTTCTGGTGCCCAGAAAGAAAAGGAGTGGCAGACTTTATTCAAGAGGTAATCTCTAAGAAGGATCAAAGGCAATACTGGTACCGCACAGATATTCCTTACAGTTATGTTTCAGTGGATGAGTTCTCTCAAATCTTCAAAACAAGTTATTGGGGAAGAATGTTAGATGATGATCTCTCACAGCCATATGATAAATCTCAGTCCCATAAAAATGCTTTATCATTTAGCAAGTACTCCTTGGGAAAGTTGGAGTTGTTTAAAGCTTGCATGAGGAGGGAGATTCTTCTCATGAAACGAAACTCATTTATCTATATATTCAAAACTGTACAGCTTACAATCACAGCAATCATAACAATGACAGTCTTCTTGCGCACTCAGCTGACTGTGGACTTGATAGGAGCAAACTATTTATTGGGTTCATTGTACTATACACTTGTTCGCCTTATGACTAATGGAGTTGCTGAGTTGATCATGACTATTACTAGACTCCCTGTTGTTTATAAGCAGAAGGCATTCTATCTTTATCCAGCTTGGGCTTATTGTCTTCCAGCTTCCATTCTAAAGATTCCATTTTCAGTTCTTGATGCTATTGTTTGGACATCAGTAACATATTATGTTATAGGCTACAGCCCTGAAATAACAAGGTTCCTGCGCCAGTTTCTTTTGCTTGTCACTCTGCATATGTCATCAACCTCCATGTGCCGTTTCCTTGCCTCAGTTTTCAAAACTGATGTTGCAGCTACAACTGTTGGTTCCTTGGTCTTAGTACTGATGTTCTTGTTTGGAGGCTTTATTCTTCCTAGACCATCATTGCCAAAGTGGTTGAGGTGGGGTTTTTGGCTTTCTCCTATGACATATGGTGAAATAGGAATAACACTAAATGAATTTCTTGCTCCTCGCTGGCAGAAGATCCAAGAGGGAAACATCACCATAGGAAAGGAGGTTCTTATTAGTCATGGTTTGGACTTTGATAGCAACTTCTACTGGCTATCAATTGGAGCCTTACTTGGTTTCACAGTACTATTTGATTTTGGATTTATCTTAGCATTAACTTACTTAAAAGAGCCAAAGATGTCTCGAGCTTTAGTCTCACAAAAGAAGCTCTCTCAACTAAAGGGAGAAGAAAAAAGCAGTAGCATTGAACTAAAAAGTAAGTCAGTTGCAGTTGATATTGGCCACACATCAAAGGAAGCTCAAAACACAGGGAAAATGGTCCTGCCCTTTCAGCCACTGTCAATAGCATTTAAGGATGTCCAGTATTTTGTTGACACTCCTCCGGAGATGAGAAAACACGGTTCCAATGAGAAAAAACTACAATTGCTCCGCGATATCACAGGAGCCTTTAGGCCAGGAATTCTTACTGCACTTATGGGAGTTAGTGGAGCAGGGAAGACAACTCTCATGGATGTCCTTTCAGGAAGAAAAACTGGAGGTATCATTGAAGGAGATATAAAAATTGGAGGATACCCCAAAGTGCAGAAGACCTTTGCAAGAGTTTCAGGTTACTGTGAGCAGAATGACATACATTCACCATATATAACAGTTGGAGAATCTGTCAGATACTCAGCATGGTTGAGGTTGCCAATGGAGATTGATTCAGTCACAAAAGGGAAATTTGTTGAAGAAGTCCTTGAAACAATTGAACTTGATGATATAAAGGATTGTTTAGTTGGCATCCCTGGCCAAAGTGGCTTATCTACTGAACAACGCAAAAGACTAACCATTGCAGTGGAGCTTGTTTCCAATCCATCAATAATATTTATGGATGAACCAACATCAGGTTTGGATGCCAGAGCAGCTGCAGTTGTTATGCGTGCAGTGAAGAATGTTGTTGGCACTGGTAGGACCACGGTTTGCACCATACATCAACCAAGCATCGACATATTTGAGACTTTTGATGAGTTGATTCTAATGAAATCTGGAGGACAGATTATTTATAATGGAATGCTAGGCCATCATTCAAATAGACTGATTGAATATTTTCAGAGTATACCTGGAGTTCCAAAGATCAAGGACAATTATAATCCTGCAACCTGGATGTTGGAAGCTACATCTGCATCTATAGAAGACGAACTTCAAATAGATTTTGCAAAAATCTATAAAGAATCACACCTTCACTGGGATACCCTTGAATTGGTGAGACAGTTAAGTGAACCACCACCAGGTTCAAGAGACTTACACTTTTCAACTCGCTTCCCACAAAATAACTTGGGACAGTTTATGGCATGCCTATGGAAGCAACACTTGTCCTATTGGAGAAGTCCTGAGTACAACTTAACACGTTTCATATTCATGGTTGTAGCAGCAATTATATTTGGAGCAGTATTTTGGCAGAAAGGGAATGAAGTAAACAATCAGCAGGACTTGTTCAATGTGCTTGGATCAATGTATATTGCTGTAATATTCTTGGGAATTAATTACTGTTCAACAATTCTACCATATGTGGCAACTGAGCGCAATGTGTTGTATAGAGAAAAATTTGCTGGAATGTATTCTTCCAAGGCCTATTCATTTGCACAGGTGGCCATTGAAATACCATATATCTTAGTTCAATCAATTTTATATGTGGCTATCACATATCCAATGATAGGTTTCGAATGGTCAGTTCCAAAAGTGTTTTGGTACTTCTACACCACATTCTGCACATTTTTATACTTTGTATATCTTGGAATGCTGATAATGTCATTGAGCTCAAACATCGATCTAGCTTCTGTGTTGTCAACTGCAGTCTACACCATATTCAATCTCTTTTCTGGATTCCTCATGCCAGGACCGAAAATTCCTAAATGGTGGGTTTGGTGCTATTGGATTTGCCCTACTGCTTGGTCCTTGAATGGCCTTCTAACTTCACAATATGGAGACATAGACAAAGAGATACTCATATTTGGGGAGAAAAAATCAGTGGATTCCTTTCTAAAAGATTACTATGGGTTCAGGCATGACAGATTAAGTGTTGTGGCTGTGGTGCTCATTGCTTTCCCAATTGTTTATGCCTCTCTCTTTGCCTATTGCATAGGGAAAATAAATTACCAAAAGAGATAG 4215 0.4021 MAELLSKPRSTTAGRCPTSVYQNSLSQEESGSGTKDADDKKVVDVTKLGAVEKRLFIDRLIKHIENDNLQLLKRLRDRMDRVNVKLPTVEVKYKNLHVEAECEVVQGKALPTLWNSFSSFLSGFMKTISCSSQGAKMSILNDVSGIIKPSRLTLLLGPPGCGKTTLLMALAGKLEQSLKASGEISYNGYNLDQFVPQKTSAYISQYDLHVPEMTVRETIDFSAQCQGVGSRADIVAEISQREKEEGIIPDPDIDTYMKAISVEGQSENLQTEYVLKILGLDICADILVGDALDRGISGGQKKRLTTGEMIVGPIKALFMDEISTGLDSSTTFQIVTCLQQLVHITDATAVLSLLQPAPETFELFDDLILMAEGKIVYHGPRSQALQFFKDCGFWCPERKGVADFIQEVISKKDQRQYWYRTDIPYSYVSVDEFSQIFKTSYWGRMLDDDLSQPYDKSQSHKNALSFSKYSLGKLELFKACMRREILLMKRNSFIYIFKTVQLTITAIITMTVFLRTQLTVDLIGANYLLGSLYYTLVRLMTNGVAELIMTITRLPVVYKQKAFYLYPAWAYCLPASILKIPFSVLDAIVWTSVTYYVIGYSPEITRFLRQFLLLVTLHMSSTSMCRFLASVFKTDVAATTVGSLVLVLMFLFGGFILPRPSLPKWLRWGFWLSPMTYGEIGITLNEFLAPRWQKIQEGNITIGKEVLISHGLDFDSNFYWLSIGALLGFTVLFDFGFILALTYLKEPKMSRALVSQKKLSQLKGEEKSSSIELKSKSVAVDIGHTSKEAQNTGKMVLPFQPLSIAFKDVQYFVDTPPEMRKHGSNEKKLQLLRDITGAFRPGILTALMGVSGAGKTTLMDVLSGRKTGGIIEGDIKIGGYPKVQKTFARVSGYCEQNDIHSPYITVGESVRYSAWLRLPMEIDSVTKGKFVEEVLETIELDDIKDCLVGIPGQSGLSTEQRKRLTIAVELVSNPSIIFMDEPTSGLDARAAAVVMRAVKNVVGTGRTTVCTIHQPSIDIFETFDELILMKSGGQIIYNGMLGHHSNRLIEYFQSIPGVPKIKDNYNPATWMLEATSASIEDELQIDFAKIYKESHLHWDTLELVRQLSEPPPGSRDLHFSTRFPQNNLGQFMACLWKQHLSYWRSPEYNLTRFIFMVVAAIIFGAVFWQKGNEVNNQQDLFNVLGSMYIAVIFLGINYCSTILPYVATERNVLYREKFAGMYSSKAYSFAQVAIEIPYILVQSILYVAITYPMIGFEWSVPKVFWYFYTTFCTFLYFVYLGMLIMSLSSNIDLASVLSTAVYTIFNLFSGFLMPGPKIPKWWVWCYWICPTAWSLNGLLTSQYGDIDKEILIFGEKKSVDSFLKDYYGFRHDRLSVVAVVLIAFPIVYASLFAYCIGKINYQKR* 1405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g05034 1404 MobiDBLite consensus disorder prediction 11 31 - -
Rops2g05034 1404 FunFam ABC transporter G family member 34 127 431 - -
Rops2g05034 1404 SMART AAA_5 149 381 IPR003593 GO:0016887
Rops2g05034 1404 SMART AAA_5 841 1033 IPR003593 GO:0016887
Rops2g05034 1404 CDD ABCG_PDR_domain2 801 1039 IPR034003 -
Rops2g05034 1404 PANTHER PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 36 1404 - -
Rops2g05034 1404 Pfam ABC-2 type transporter 1130 1342 IPR013525 GO:0016020|GO:0140359
Rops2g05034 1404 Pfam ABC-2 type transporter 476 687 IPR013525 GO:0016020|GO:0140359
Rops2g05034 1404 Pfam ABC transporter 832 984 IPR003439 GO:0005524
Rops2g05034 1404 Gene3D - 818 1050 IPR027417 -
Rops2g05034 1404 Gene3D - 125 390 IPR027417 -
Rops2g05034 1404 Pfam ABC-2 type transporter 1013 1074 IPR043926 GO:0140359
Rops2g05034 1404 Pfam ABC-2 type transporter 355 428 IPR043926 GO:0140359
Rops2g05034 1404 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 125 397 IPR003439 GO:0005524
Rops2g05034 1404 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 828 1037 IPR027417 -
Rops2g05034 1404 MobiDBLite consensus disorder prediction 1 38 - -
Rops2g05034 1404 Pfam ABC transporter 140 322 IPR003439 GO:0005524
Rops2g05034 1404 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 137 397 IPR027417 -
Rops2g05034 1404 FunFam ABC transporter G family member 34 818 1050 - -
Rops2g05034 1404 Pfam Plant PDR ABC transporter associated 692 754 IPR013581 -
Rops2g05034 1404 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 804 1057 IPR003439 GO:0005524
Rops2g05034 1404 Pfam ABC-transporter N-terminal 44 115 IPR029481 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g05034 Rops-Chr2 90312477 90331129 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g05034 938 1016 Calmodulin-binding Proteins AT2G36910 37.975 8.93e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g05034 K08711 - gmx:100779615 2464.11