Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04982 ATGGCCATGCGATTAGTATTATTGTGTCTAGTGATTCTCAAGCTCACTTCAGCATTTGCAACCACATTGAATGAAGCCTATGGTGGTGATACTGGCTGTCCATTGGGGACTGACATATACCAATACACTTGCCCAGAAGCAGAGGCCATCATCTTCTCTTGGGTGGAACAGACACTCTCTGAAGACTCCAGAATGGCAGCCTCACTGCTTAGGCTACATTTTCATGATTGCTTTGTTAATGGTTGTGATGCTTCAGTCTTGCTGGATGACACACCGGACTTCATTGGTGAAAAAACTGCAGGTCCAAACTTGAATTCACTAAGAGGATTTGAAGTAATCGACAACATCAAATCTGAACTAGAACTAGTCTGTCCACAAACTGTCTCTTGTGCTGATATACTTGCAACTGTTGCTCGAGATTCAGTTCTTCTGTCAGGAGGTCCAACTTGGGATGTGCAAAAGGGAAGAAAAGATGGTATGACTGCAAGCAAGGACGCAGCAAATAACAACATCCCAGCCCCAAACTCAACTGTTGATATGCTCGTTGCAAAGTTCGAGAATGTAGGCCTTACACTCACAGACATGGTCGCCCTTTCAGGTGCGCACACAATAGGAAAAGCACGCTGCTCAACATTTAGCTCTCGTTTACAGCGCAACAGCGAAGATAATCCTGATGTTAATATTGATTTCATTGCATCATTGCAACAGTTGTGCTCAATACCGGATAATAGCAACCAGATTGCACATCTTGACTTGGCCACTCCAGCCACGTTCGATAACCAATACTATGTTAATCTTCTTTCTGGGGAGGGTCTGCTTCCGTCAGACCAAGCTCTAGTGAATGGAAATGATCAGACACGAGAGATTGTTGAAGCCTACGTGGAGAATCCATTCGCTTTCTTTGAGGACTTCAAGAATTCAATGTTGAAAATGGGAAGATTGGGATCGATCACTCAGAGCAATGGCGAGATTCGTAGGGACTGCCGAACTATCAACTAA 999 0.4424 MAMRLVLLCLVILKLTSAFATTLNEAYGGDTGCPLGTDIYQYTCPEAEAIIFSWVEQTLSEDSRMAASLLRLHFHDCFVNGCDASVLLDDTPDFIGEKTAGPNLNSLRGFEVIDNIKSELELVCPQTVSCADILATVARDSVLLSGGPTWDVQKGRKDGMTASKDAANNNIPAPNSTVDMLVAKFENVGLTLTDMVALSGAHTIGKARCSTFSSRLQRNSEDNPDVNIDFIASLQQLCSIPDNSNQIAHLDLATPATFDNQYYVNLLSGEGLLPSDQALVNGNDQTREIVEAYVENPFAFFEDFKNSMLKMGRLGSITQSNGEIRRDCRTIN* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04982 332 PRINTS Plant peroxidase signature 306 319 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops2g04982 332 PRINTS Plant peroxidase signature 108 121 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops2g04982 332 PRINTS Plant peroxidase signature 146 161 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops2g04982 332 PRINTS Plant peroxidase signature 44 63 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops2g04982 332 PRINTS Plant peroxidase signature 193 205 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops2g04982 332 PRINTS Plant peroxidase signature 265 282 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops2g04982 332 PRINTS Plant peroxidase signature 68 88 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops2g04982 332 PRINTS Plant peroxidase signature 249 264 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops2g04982 332 PRINTS Plant peroxidase signature 127 137 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops2g04982 332 ProSitePatterns Peroxidases active site signature. 66 77 IPR019794 GO:0004601
Rops2g04982 332 ProSitePatterns Peroxidases proximal heme-ligand signature. 194 204 IPR019793 -
Rops2g04982 332 ProSiteProfiles Plant heme peroxidase family profile. 34 332 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops2g04982 332 FunFam Peroxidase 172 311 - -
Rops2g04982 332 PANTHER PEROXIDASE 72-RELATED 35 330 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops2g04982 332 Pfam Peroxidase 55 295 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops2g04982 332 CDD secretory_peroxidase 35 329 IPR033905 GO:0004601|GO:0042744
Rops2g04982 332 Gene3D Peroxidase, domain 2 172 312 - -
Rops2g04982 332 SUPERFAMILY Heme-dependent peroxidases 35 332 IPR010255 GO:0004601|GO:0006979|GO:0020037
Rops2g04982 332 PRINTS Haem peroxidase superfamily signature 251 266 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops2g04982 332 PRINTS Haem peroxidase superfamily signature 146 158 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops2g04982 332 PRINTS Haem peroxidase superfamily signature 66 80 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops2g04982 332 PRINTS Haem peroxidase superfamily signature 194 209 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops2g04982 332 PRINTS Haem peroxidase superfamily signature 128 145 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops2g04982 332 FunFam Peroxidase 38 182 - -
Rops2g04982 332 Gene3D - 40 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04982 Rops-Chr2 89617393 89618695 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04982 29 332 Peroxidase AT4G16270 63.175 2.28e-140 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04982 K00430 - gmx:100787637 557.755