Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04980 ATGGCATCATCTATGATCTCAAACCCAATAACGAACACCGATCGTTCAAAGAGAAAGAAGAAGAAGAAATCACTGTTGAAGCATCAACAAGAAGATCAGAGCCACCCCAAATGGAAATCCCAAGCGCAACAACAAATCTACTCCACCAAGCTACACCAAGCCTTAACCAGAGTCAACCTAGGCTCATCCGGCTCCGCGCCGCGCCGAGGAAAAGCAGTTCGCGAAGCCGCCGACAGAGCCCTGGCAGTGACGGCTAAGGGGAGGACTCGTTGGAGCCGAGCCATACTAACGAGCCGGCTCAAGCTTAAGTTCAGGAAACACAAGAGACAGAGGGTAACGGCTGCGGCGGCGCCAAGCCGGTCAAAGAAGCCACGTTTTAGTGTTTTCCGGTTGAAAGGAAAGAGTGTACCTGGTGTTCAGAGAAAAGTGAGGTTCCTTGGACGGTTGGTTCCCGGTTGCCGGAAAGAACCGTTACCGGTGATTCTAGAAGAAGCCATTGATTATATACCTGCGCTTGAGATGCAGGTTCGAGCCATGAGCAATTTGTTTAACTTACTTTCGGCTAATGCTTCTGGAGCCGGCTCCAGTTCCACGCCGCCTAGCTCATAA 609 0.5123 MASSMISNPITNTDRSKRKKKKKSLLKHQQEDQSHPKWKSQAQQQIYSTKLHQALTRVNLGSSGSAPRRGKAVREAADRALAVTAKGRTRWSRAILTSRLKLKFRKHKRQRVTAAAAPSRSKKPRFSVFRLKGKSVPGVQRKVRFLGRLVPGCRKEPLPVILEEAIDYIPALEMQVRAMSNLFNLLSANASGAGSSSTPPSS* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04980 202 MobiDBLite consensus disorder prediction 1 44 - -
Rops2g04980 202 CDD bHLH_AtIBH1_like 130 179 IPR044549 GO:0006355
Rops2g04980 202 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 143 189 IPR036638 GO:0046983
Rops2g04980 202 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 40 186 IPR044660 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04980 Rops-Chr2 89557021 89558220 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04980 35 192 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06590 59.538 1.17e-54 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04980 - - gmx:100803765 277.33