Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04975 ATGCTTCATGCATTGATGAATCTTCTCTCTGTGTGTTGGAAGCCATTTGGGCGTGGTGGTGATAATAAATTCGATTCCGTTGGAGTTATTGGGAGCAGTTTCGGTGGAAGAGAAGGCAAAGACGGTTTAATTTGGTTTCGCGACGTCGGAAAATATGGTTCCGGTGATTTCTCCATGGCGGTGGTTCAGGCAAATCAGGTTCTCGAAGACCAGAGCCAGATCGAGTCTGGTCCTCTTGGAACCTTCGTTGGTATATATGATGGTCATGGAGGACCTGATGCATCGAGATACGTTTGCGATCACTTGTTTCGCCATTTTCAAGCAATATCAGCTGAGTCACACGGAGTTGTGACAACTGAGACTATTGAAAGGGCATTCCGCCAAACAGAAGAGGGGTACACTGCCCTCGTGTCAGATTTATGGAGTTCTCGACCTCAAATTGCTAGTGCCGGGACCTGTTGTCTAGTTGGAGTGATATTTCAGCAAACACTCTTTGTGGCAAACGCTGGAGATTCCCGTGTTGTATTGGGTAAGAAAGTTGGCAACACTGGTGGTGTTGCTGCAATTCAACTGTCTACAGAACACAATGCAAATATTGAGGCTATTAGACAGGAACTTAGAGAATTGCACCCTCATGATCCCCAGATTGTTGTCCTCAAACATGGAGTGTGGAGAGTAAAAGGCATTATTCAGGTTTCTAGATCTATAGGTGACGTATATATGAAAAAAGCGCAGTTTAACCGAGAACCACTTCAAGCAAAATTCAGACTTCCTGAACCAATGAACATGCCTATCTTGAGTGCTAATCCCACAATTTTTTCTCATTCTCTCCAGCCAAGTGATTCATTTCTTATATTTGCATCTGATGGTTTATGGGAGCACCTAAGTAATGAAAAAGCTGTAGATATTGTCAACAGCAATCCACATGCAGGTAGTGCCAAGAGACTTGTGAAGGCTTGTCTCCACGAAGCAGCAAGAAAACGAGAAATGCGATATTCGGACCTCCGTAAGATTGACAAGAAGTCTTATAGGAGTTTTTGGCAACTGTACCGCACGAGGAAGATACACCATTGGTACCTGGCTTGA 1086 0.442 MLHALMNLLSVCWKPFGRGGDNKFDSVGVIGSSFGGREGKDGLIWFRDVGKYGSGDFSMAVVQANQVLEDQSQIESGPLGTFVGIYDGHGGPDASRYVCDHLFRHFQAISAESHGVVTTETIERAFRQTEEGYTALVSDLWSSRPQIASAGTCCLVGVIFQQTLFVANAGDSRVVLGKKVGNTGGVAAIQLSTEHNANIEAIRQELRELHPHDPQIVVLKHGVWRVKGIIQVSRSIGDVYMKKAQFNREPLQAKFRLPEPMNMPILSANPTIFSHSLQPSDSFLIFASDGLWEHLSNEKAVDIVNSNPHAGSAKRLVKACLHEAARKREMRYSDLRKIDKKSYRSFWQLYRTRKIHHWYLA* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04975 361 SMART PP2C_4 43 321 IPR001932 -
Rops2g04975 361 ProSitePatterns PPM-type phosphatase domain signature. 82 90 IPR000222 GO:0043169
Rops2g04975 361 FunFam Probable protein phosphatase 2C 42 47 349 - -
Rops2g04975 361 Pfam Protein phosphatase 2C 80 324 IPR001932 -
Rops2g04975 361 ProSiteProfiles PPM-type phosphatase domain profile. 56 361 IPR001932 -
Rops2g04975 361 SUPERFAMILY PP2C-like 66 322 IPR036457 -
Rops2g04975 361 PANTHER PROTEIN PHOSPHATASE 54 330 IPR015655 GO:0004722|GO:0006470
Rops2g04975 361 Gene3D - 48 347 IPR036457 -
Rops2g04975 361 CDD PP2Cc 57 328 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04975 Rops-Chr2 89486542 89490852 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04975 1 310 PP2C-type Phosphatase Gene Family AT3G17090 69.551 4.84e-155 436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04975 K01102 - gmx:100790813 620.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g04975 2 89486542 89490852 Rops2g04975 2 89486542 89490852 ECH
Rops2g04975 2 89486542 89490852 Rops11g01445 11 21553568 21559096 PCT