Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04968 ATGGGAACCCCATCAAAAGAAGAAGTTCTCAAGAAGATCCAAGACCTTGAAGATGGTCATGCTCATCTCAAGCAAGAAATGTCAAAGCTTAAACTTTCCGGTGCCGGAGTTAAGCACCGGCAAAGGTCTCACTCCGTGTCACCTCAACGTTCGAGATTTGGTGCACCACCCAAGACCAGAACCGATGGACCAGTTTTGTTGAAGAAGGGTTCTTGTTCCTTCAAACAATCTTCACCTCTTCAAAGGGAAAGTCGTGGTGGTGAACCTCAAAATGATGCACAAGGAGAAGAAGGAGAAGGAAAAGGGTGTGGCCCTTCTGCTGTGAATTTCACTGAAGGGCTATATATTAATATTTTGCAGTCAATGGGACAATCTGTTCATATATTGGATCTTAGCTATCGCATAATTTACTGGAACAGAAGTGCTGAACATCTATATGGCTATGCAGCAGAGGAAGCTTTAGGACAGGAAGGGATTGAGCTGCTTGTAGACCCCAAGGATTTTGCCTTAGCCTATGATATAGTGAACCGTGTCATGATGGGAGAGAGTTGGACTGGGCAATTCCCGGTCAAGAATAAGATGGGGGAGAAATTTTTAGCTGTAGCAACTGATACACCTTTTTATGATGATGATGGAAGCTTAGTTGGGATTATTTGTGTCTCAATTGATTCACGGCCCTTTTTTGAAATGAGAGTTCCGTTGTCAGGGGTAAAGACTACTGAATCAGATTCAGGTTCCTCCCGTTTTAGAAGTAGCATTACAAATAAACTTGGCCTTGATTCTCAACAGCCACTTCAAGCTGCACTGGCATCTAAAATTTCAAATTTGGCATCAAAGGTGAGTAACAAAGTCAAGTCAAGAATGAGGACGGGAGAAAATAATGTGGATCATGAAGGTGGGAGTGGAGAAAGTCATCAATTTGAACATGGTTTCTCAGAATCTGTTCTTTCAGACCATAGAGAAGATGCTAATTCAAGTGGAGCTAGCACGCCCAGAGGTGATTTACCACAGTCCCCTTTTGGTGTATTTTCCCATGTTGAAGAAAAATCTCATGGAAAAACTTTGAGAGACTCTGGTGATGAGTATGAAGGAAGCCCTATTCACAAAATCATACCTTCTAAGGCCGAAGCCTGGATTCAAAAGAAAACATTATCATGGCCATGGAGAACAAATGATCGGGATGGATCAGAGGCAAGGAATGCTCGTGTTGCTGGGCTGTGGAGACAGAATGATCAAGAAAATGAGGCAGTTAATCAGAAGGCCTTTTCTTCTGGCTTGAGGCAGGAAAGCCAGGCAGGTGAAAGTAATCGCCCTAGTAACAATGAGGCTTCAGGATCCTGGTCCTCCTCCTTAAATATTAACAGCACAAGTAGTGCCAGCAGCTGTGGGAGTACCAGCAGTGGTGCTGTCAATAATAAAGTGGATGTAGACACTGATTGCTATGATTATGAAATTTTGTGGGAGGACCTGACAATTGGAGAACAAATTGGACAAGGTTCTTGTGGAACTGTATATCGTGCTCTGTGGTATGGATCAGATGTTGCTGTCAAGGTTTTCTCAAGGCAAGAATATTCAGAAGATGTGATACTGTCCTTCAGACAAGAGGTGTCTGTAATGAAAAGACTTCGACACCCAAATATTCTCCTCTTTATGGGGGCAGTGACTTCACCTCAACATCTCTGCATTGTGACAGAGTTTCTCCCACGTGGAAGCTTGTATCACTTGTTACACAAAAACACATCCAAACCTGACTGGAGACGGCGAGTTCGAATGGCCTTGGATATTGCACGAGGCGTAAATTATCTTCATCATAGTAACCCACCTATCATCCACAGAGATTTGAAGTCTTCAAATCTTCTAGTTAATAATTGGACTGTGAAGGTTGGTGATTTTGGTCTTTCACGTCTTAAGCATGAAACATATCTCACAACTAAGACAGGGAGGGGCACGCCTCAATGGATGGCACCAGAAGTTCTTCGTAATGAACCATCAGATGAGAAGTCTGACGTTTATAGCTTTGGGGTAATATTATGGGAACTTGTGACGGAAAAGATCCCTTGGGATAATCTCAACCCAATGCAGGTGATTGGAGCTGTAGGGTTCATGAATCAGCGGCTAGAAATTCCAAAAGATGTTGATCCGTGGTGGGTTTCTATAATTGAAAGCTGCTGGCATAGTGATCCAACATGCCGACCAGCATTCCAGGAACTGCTCGAAAGGCTTAAAGATCTGCAAAAACGGTATGCGATTCAGTTCCAGGCAGCTCGATCGGCTGGTGGGGAAAGCACCCAAAAGGAGCCCTAG 2304 0.4366 MGTPSKEEVLKKIQDLEDGHAHLKQEMSKLKLSGAGVKHRQRSHSVSPQRSRFGAPPKTRTDGPVLLKKGSCSFKQSSPLQRESRGGEPQNDAQGEEGEGKGCGPSAVNFTEGLYINILQSMGQSVHILDLSYRIIYWNRSAEHLYGYAAEEALGQEGIELLVDPKDFALAYDIVNRVMMGESWTGQFPVKNKMGEKFLAVATDTPFYDDDGSLVGIICVSIDSRPFFEMRVPLSGVKTTESDSGSSRFRSSITNKLGLDSQQPLQAALASKISNLASKVSNKVKSRMRTGENNVDHEGGSGESHQFEHGFSESVLSDHREDANSSGASTPRGDLPQSPFGVFSHVEEKSHGKTLRDSGDEYEGSPIHKIIPSKAEAWIQKKTLSWPWRTNDRDGSEARNARVAGLWRQNDQENEAVNQKAFSSGLRQESQAGESNRPSNNEASGSWSSSLNINSTSSASSCGSTSSGAVNNKVDVDTDCYDYEILWEDLTIGEQIGQGSCGTVYRALWYGSDVAVKVFSRQEYSEDVILSFRQEVSVMKRLRHPNILLFMGAVTSPQHLCIVTEFLPRGSLYHLLHKNTSKPDWRRRVRMALDIARGVNYLHHSNPPIIHRDLKSSNLLVNNWTVKVGDFGLSRLKHETYLTTKTGRGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELVTEKIPWDNLNPMQVIGAVGFMNQRLEIPKDVDPWWVSIIESCWHSDPTCRPAFQELLERLKDLQKRYAIQFQAARSAGGESTQKEP* 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04968 767 CDD PAS 122 223 IPR000014 -
Rops2g04968 767 PRINTS Tyrosine kinase catalytic domain signature 649 659 IPR001245 GO:0004672|GO:0006468
Rops2g04968 767 PRINTS Tyrosine kinase catalytic domain signature 564 577 IPR001245 GO:0004672|GO:0006468
Rops2g04968 767 PRINTS Tyrosine kinase catalytic domain signature 712 734 IPR001245 GO:0004672|GO:0006468
Rops2g04968 767 PRINTS Tyrosine kinase catalytic domain signature 668 690 IPR001245 GO:0004672|GO:0006468
Rops2g04968 767 PRINTS Tyrosine kinase catalytic domain signature 603 621 IPR001245 GO:0004672|GO:0006468
Rops2g04968 767 Gene3D Phosphorylase Kinase; domain 1 483 567 - -
Rops2g04968 767 Gene3D PAS domain 123 225 - -
Rops2g04968 767 MobiDBLite consensus disorder prediction 71 88 - -
Rops2g04968 767 Gene3D Transferase(Phosphotransferase) domain 1 568 766 - -
Rops2g04968 767 FunFam PAS domain-containing protein tyrosine kinase 483 567 - -
Rops2g04968 767 SUPERFAMILY Protein kinase-like (PK-like) 478 741 IPR011009 -
Rops2g04968 767 MobiDBLite consensus disorder prediction 411 450 - -
Rops2g04968 767 SUPERFAMILY PYP-like sensor domain (PAS domain) 117 223 IPR035965 -
Rops2g04968 767 FunFam PAS domain-containing protein tyrosine kinase family protein 568 758 - -
Rops2g04968 767 NCBIfam PAS domain S-box protein 112 223 IPR000014 -
Rops2g04968 767 ProSiteProfiles Protein kinase domain profile. 490 748 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g04968 767 Coils Coil 6 33 - -
Rops2g04968 767 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 276 747 - -
Rops2g04968 767 SMART serkin_6 490 749 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g04968 767 SMART pas_2 113 180 IPR000014 -
Rops2g04968 767 MobiDBLite consensus disorder prediction 406 450 - -
Rops2g04968 767 Pfam PAS fold 117 221 IPR013767 GO:0006355
Rops2g04968 767 CDD STKc_MAP3K-like 496 741 - -
Rops2g04968 767 Pfam Protein tyrosine and serine/threonine kinase 490 741 IPR001245 GO:0004672|GO:0006468
Rops2g04968 767 MobiDBLite consensus disorder prediction 282 341 - -
Rops2g04968 767 MobiDBLite consensus disorder prediction 285 304 - -
Rops2g04968 767 ProSitePatterns Serine/Threonine protein kinases active-site signature. 609 621 IPR008271 GO:0004672|GO:0006468
Rops2g04968 767 MobiDBLite consensus disorder prediction 31 104 - -
Rops2g04968 767 ProSiteProfiles PAS repeat profile. 111 182 IPR000014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04968 Rops-Chr2 89309530 89316596 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04968 1 758 MAP Kinase Kinase Kinase AT3G06620 60.489 0.0 915
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Rops2g04968 PK_Tyr_Ser-Thr 3.6e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04968 - - gmx:100800867 1211.82