Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04962 ATGGTTGACACTTACAGTATGGAGAGCAAGGTTCTTATAAGAGAGTTTGATGAAGATAGAGATGTTAAAGTGGTGGGGAAGCTTGAAAGGCACTGTGAGATTGGGACTAAAAAAGGGGTCTCCATTTTCACCAACATGATGGGTGATCCTTTATCTAGGATTAGGTTCTACCCCCTTCATGTTATGTTGGTGGCTGAACTGTTTGAAAGCAGAGAACTTGTTGGAGTAGTTCGAGGATGCATTAAGAGTGTGCGTACTCCTTCTGGATCACTTCTGAAAATGGGTTGCATATTAGGCCTCAGAGTCTCTCCTACCCACAGGAGAAAAGGGGTCGGACTAAAACTTGTGACCTCAATTGAAGAATGGATCTTGAGAAATGGGGCTGAGTACTCATTCCTAGCCACTGAAAACAACAATGATGCCTCTAAAAACCTATTTACCAACAAATGCAACTATGTGAAGCTTAGCTCACTTGTCATATTTGTCCATCCAACTAGTTTCCCTGCAAAGCATATTTCCAAGGAGATAAAAATAGAGAAAGTAAACATAGACCAGGCAATTTCCTTGTACAGAAGAACCATGAGGGCCAAAGAGTTGTGTCCGTTAGACATGGATGTTATTTTGAAGGAGAAACTCAGCTTGGGAACTTGGGTAAGTTATTACAAAGATGAAGGTTGGCTCAACTTGCAGAGGAAGGTAGATATTGAAGACATTACCAATGAAACCACAAGCTCATGGGTCATATTTAGCATATGGAATACTTGTGAAGCTTACAAGCTTCAACTTAAAAAGTCTCATCCACTGAGGTTTCTTCACACAACTTTAAATCATGCAAGATATAAAATTTTCCCTTGTTTGAGAATGTCAGTGAGTGACTCACTTTGTAGACCTTTTGGGTTTCTTTTCCTCTATGGACTCCATGGAGAGGGAGAGAATCTTGGGGAGTTAATGGAATCTATATGGAGGTTCACATCAACATTGGGAGAAAATTTGAGTGACTGCAAAGTGATTATAACTGAGTTAGGGTTCGGTGATCCACTTTTAAACCACGTTCCTCAAACAGCTTCTATGTCTTGTATTGATGATATTTGGTACACAAAAAGACTTTCAAGCCACAGTGATGATGAAAAGGATGAATTGATGACGATGAAGAGACAGCTCGGGAATGTGCTTGTTGACCCTAGGGATTTTTAG 1194 0.4028 MVDTYSMESKVLIREFDEDRDVKVVGKLERHCEIGTKKGVSIFTNMMGDPLSRIRFYPLHVMLVAELFESRELVGVVRGCIKSVRTPSGSLLKMGCILGLRVSPTHRRKGVGLKLVTSIEEWILRNGAEYSFLATENNNDASKNLFTNKCNYVKLSSLVIFVHPTSFPAKHISKEIKIEKVNIDQAISLYRRTMRAKELCPLDMDVILKEKLSLGTWVSYYKDEGWLNLQRKVDIEDITNETTSSWVIFSIWNTCEAYKLQLKKSHPLRFLHTTLNHARYKIFPCLRMSVSDSLCRPFGFLFLYGLHGEGENLGELMESIWRFTSTLGENLSDCKVIITELGFGDPLLNHVPQTASMSCIDDIWYTKRLSSHSDDEKDELMTMKRQLGNVLVDPRDF* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04962 397 Pfam Acetyltransferase (GNAT) family 65 152 IPR000182 GO:0016747
Rops2g04962 397 CDD NAT_SF 62 133 - -
Rops2g04962 397 Gene3D - 21 164 - -
Rops2g04962 397 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 7 397 - -
Rops2g04962 397 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 11 234 IPR000182 GO:0016747
Rops2g04962 397 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 8 153 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04962 Rops-Chr2 89209022 89210585 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Rops2g04962 Acetyltransf_1 6.2e-13 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04962 - - gmx:100814448 667.537
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g04962 2 89209022 89210585 Rops2g04962 2 89209022 89210585 ECH