Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops2g04960 | ATGACGTTTTGGTGGACATTGCTCGTTTTAGCATTCGCTTATGGAATCTGTAGGTTCCTTTTCATGCTCATTCCTCCTAAGGTTCCTTCCATCGACGTTGACACTTCCGATGTGCTGGAAGATGGAAACCAAGCGCAGGAGAACAGCTTCATATATGTACCTCCGAGGGGAACATCGCAGCAATCTGGGAAGATAGTTCAGTGCTATGAGCCTGCAACTATGAAATACTTGGGATATGTTCCTGCATTGACACATGATGAGGTCAAGGATCGAGTGGCAAAAGTAAGAAAGGCACAAAAAATGTGGGCAAAGTCCAGCTTCAAACAAAGACGCTTGTTTTTGCGTATACTTTTGAAGTATATTATTAAACATCAAGCACTTATATGCGAAATATCTTCACGTGATACTGGAAAGACGATGGTAGATGCCTCTTTAGGAGAAATAATGACAACATGCGAGAAGATCAATTGGCTACTGTCAGAGGGCGAGCGGTGGCTAAGGCCTGAATACCGGTCTTCTGGAAATTCAATGCTTCATAAGAGAGCCAAAGTAGAATTTCACCCCCTTGGTGTTATTGGAGCCATTATTTCGTGGAATTATCCTTTCCACAATATTTTTAATCCTATGTTGGCAGCAATTTTTTCTGGAAACGGCATTGTGATTAAGATATCAGAACATGCAAGTTGGTCTGGATGCTTTTACTTCCGGATCATCCAATCAGCCCTTGCTGCCATAGGAGCTCCAGAGGACCTTGTTGAAGTGATAACAGGGTTTGCTGAAACAGGAGAAGCATTGGTATCTTCCGTCGATAAAGTCATATTTGTTGGATCACCTGGTGTTGGTAAGATGATAATGAGAAATGCTGCTGAGACACTTATACCAGTTACACTCGAGCTTGGTGGAAAAGATGCGTTTATTGTTTGTGAGGATGTGGATTTGGACCATGTTGCACAAATTGCAGTCAGGGCTGTTCTTCAGTCAAGTGGACAGAATTGTGCTGGGGCTGAGCGATTTTATGTCCACAGGGAAATTTATTCTTCTTTTGTCAGTAAAGTTACCAAAATCATAAAGTCTGTTACAGCTGGTCCACCACTTGTTGGAAAGTATGACATGGGAGCTTTATGCATGCATGAGCATTCTGAAAAGCTTGAAGGTCTTGTAAATGATGCAATAGACAAAGGAGCTGAAATTGTTGCGCGTGGAAGTTTTGGACATATAGGTGAAGATGCAGTTGATCAGTATTTCCCCCCTACTGTGCTTGTGAATGTAAACCACTCAATGAGATTGATGCAAGAAGAGGCATTTGGGCCGATAATGCCAATAATGAAATTTAGCTCTGATGAGGAGGTTGTCAAGCTTGCAAACGACTCAAAATATGGCCTCGGCTGTGCAGTTTTCTCAGGCAGTCAGAGCCGTGCCAGAGAGATAGCTTCACAGATACATTGTGGGGTAGCTGCAGTTAATGATTTTGCAGCAACATACATGTGTCAGTCCCTGCCATTTGGGGGTGTGAAACATAGTGGATTTGGACGATTCGGTGGTGTAGAAGGTTTGCGAGCTTGCTGTCTTGTTAAAGCAGTTGTTGAAGATCGATGGTGGCCATTTGTCAAAACCAAGATACCTAAGCCTATTCAGTATCCTGTTGCAGAGAATGGATTTGAATTTCAGGAGTCACTTGTTGAAGCACTTTATGGGCTCAACATATGCGACCGATTGCGAGCCTTAGTAAACGTTTTAAAAATGCTTTCGGAGCAGAACCCTGCTGGCAGCAGCATAAAGAAAAAAAATGACTAA | 1794 | 0.4275 | MTFWWTLLVLAFAYGICRFLFMLIPPKVPSIDVDTSDVLEDGNQAQENSFIYVPPRGTSQQSGKIVQCYEPATMKYLGYVPALTHDEVKDRVAKVRKAQKMWAKSSFKQRRLFLRILLKYIIKHQALICEISSRDTGKTMVDASLGEIMTTCEKINWLLSEGERWLRPEYRSSGNSMLHKRAKVEFHPLGVIGAIISWNYPFHNIFNPMLAAIFSGNGIVIKISEHASWSGCFYFRIIQSALAAIGAPEDLVEVITGFAETGEALVSSVDKVIFVGSPGVGKMIMRNAAETLIPVTLELGGKDAFIVCEDVDLDHVAQIAVRAVLQSSGQNCAGAERFYVHREIYSSFVSKVTKIIKSVTAGPPLVGKYDMGALCMHEHSEKLEGLVNDAIDKGAEIVARGSFGHIGEDAVDQYFPPTVLVNVNHSMRLMQEEAFGPIMPIMKFSSDEEVVKLANDSKYGLGCAVFSGSQSRAREIASQIHCGVAAVNDFAATYMCQSLPFGGVKHSGFGRFGGVEGLRACCLVKAVVEDRWWPFVKTKIPKPIQYPVAENGFEFQESLVEALYGLNICDRLRALVNVLKMLSEQNPAGSSIKKKND* | 598 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops2g04960 | 597 | FunFam | Aldehyde dehydrogenase 22A1 | 305 | 500 | - | - | |
Rops2g04960 | 597 | Gene3D | Aldehyde Dehydrogenase; Chain A, domain 1 | 66 | 525 | IPR016162 | GO:0016491 | |
Rops2g04960 | 597 | FunFam | aldehyde dehydrogenase 22A1 | 65 | 320 | - | - | |
Rops2g04960 | 597 | PANTHER | ALDEHYDE DEHYDROGENASE-RELATED | 59 | 527 | - | - | |
Rops2g04960 | 597 | CDD | ALDH_F15-22 | 69 | 531 | - | - | |
Rops2g04960 | 597 | Pfam | Aldehyde dehydrogenase family | 60 | 527 | IPR015590 | GO:0016491 | |
Rops2g04960 | 597 | ProSitePatterns | Aldehyde dehydrogenases glutamic acid active site. | 297 | 304 | IPR029510 | GO:0016491 | |
Rops2g04960 | 597 | Gene3D | Aldehyde Dehydrogenase; Chain A, domain 2 | 305 | 500 | IPR016163 | GO:0016620 | |
Rops2g04960 | 597 | ProSitePatterns | Aldehyde dehydrogenases cysteine active site. | 325 | 336 | IPR016160 | GO:0016491 | |
Rops2g04960 | 597 | SUPERFAMILY | ALDH-like | 60 | 529 | IPR016161 | GO:0016491 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops2g04960 | Rops-Chr2 | 89184135 | 89191292 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops2g04960 | 1 | 596 | Aldehyde Dehydrogenase Gene Family | AT3G66658 | 78.859 | 0.0 | 1023 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops2g04960 | - | - | gmx:100802990 | 1153.27 |