Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04938 ATGGTGGATCCAAGTGGGAAAGGATCAGAAGGTGAAGACTCAAACCCTAATGGTGCTTCTTCAGGGAATGAACAGAAGAAATCTTGTGCTGATTGTGGCACAACAAAAACCCCTCTTTGGAGAGGTGGTCCTGCAGGTCCCAAATCGCTTTGTAATGCTTGTGGGATCAGGAGCAGGAAGAAGAAAAGAGCGATTTTGGGGATAAGCAAGGGAAGTAACAATGAAGATAATAGAAACAAAAAGGGGAAAAGGAGTGGGAGCAATTTGAACTTGAAGCAGAGACTATTGGTTTTGGGGAGAGAGGTTTTGATGCAGAGATCACATTGGAAGAAGTTGAAGGAAGAAGAACAAGCTGCGGTGTTGCTCATGTCACTATCTTATGGATCCGTTTATGCTTAA 399 0.4361 MVDPSGKGSEGEDSNPNGASSGNEQKKSCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKKRAILGISKGSNNEDNRNKKGKRSGSNLNLKQRLLVLGREVLMQRSHWKKLKEEEQAAVLLMSLSYGSVYA* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04938 132 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 23 63 - -
Rops2g04938 132 ProSitePatterns GATA-type zinc finger domain. 29 54 IPR000679 GO:0006355|GO:0043565
Rops2g04938 132 Pfam GATA zinc finger 29 63 IPR000679 GO:0006355|GO:0043565
Rops2g04938 132 SMART GATA_3 23 83 IPR000679 GO:0006355|GO:0043565
Rops2g04938 132 MobiDBLite consensus disorder prediction 10 32 - -
Rops2g04938 132 Gene3D - 23 89 IPR013088 GO:0006355|GO:0008270
Rops2g04938 132 MobiDBLite consensus disorder prediction 1 52 - -
Rops2g04938 132 ProSiteProfiles GATA-type zinc finger domain profile. 23 59 IPR000679 GO:0006355|GO:0043565
Rops2g04938 132 PANTHER OS01G0976800 PROTEIN 11 132 - -
Rops2g04938 132 MobiDBLite consensus disorder prediction 65 88 - -
Rops2g04938 132 CDD ZnF_GATA 28 81 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04938 Rops-Chr2 88829457 88830392 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04938 25 132 C2C2-Gata Transcription Factor Family AT3G06740 61.207 1.04e-39 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Rops2g04938 GATA 5.6e-17 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04938 - - aprc:113847917 226.483
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g04938 2 88829457 88830392 Rops2g04938 2 88829457 88830392 ECH