Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04935 ATGTGGGTCTCGCAGCTCCGAAGCCAGTGTTGCTTCGGCATCATCATCACCGTCTTAGCAATCTTCCTCTCAACGACGTCGTTTTCCGATGCCCAATCCTGCAACGGCATACTCCTCTCGTACTCCTACACCGGCGGACAGCGGCTGCCGCCGAATGTCTCCGACACGGCGAAGCAACCGTACCGGTTCGAATCGACGGTGACTGTGCTGAACAACGGTCTCGATGAGCTCAAGTCATGGAAGGTCTTCGTAGGGTTTCAACACGACGAGTTTTTAGTCTCTGCTTCCAATGCCATTCTCGCCGATGGCACCACCCTCCCCGCCGCTGTCGGAAACGGCACCATTTTCGCCGGTTACCCGATGACCGATCTCAAAACCGCCGTGGAAACCGCCGGCGACTTGACTCAGATGCAGGTTCAGATCGACCTCGTCGGCACCGTCTTTGGGGTGGCGCCGCGGAGTGTTCCGATGCCCTCTTCCATCAACCTCGCTAATGATGGATTCATTTGTCGCAAATCCACCGGAGGAGGGAAGAATGCTACTAATGTGTGTTGCACTAAAGATCCCAAGTTCAAAACAAACATTACTACAGATGAAGAGTTTCTTCCACGTCAAAATGGGGATCTCACTCTTATGTATGATGTGATAAGGACTTACGATTCTAATTACTGGGCGGAGGTTACTATTGCAAATCATAACCCTCTTGGCCGTCTTGATAATTGGAGATTGAGCTGGGATTGGATGAATGATGAATTTATATTTTCAATGAAAGGGGCTTATCCATCTGTTGTAGATGCTTCTGATTGTATCTTTGGTAAGCAAGGTACATACTACAAGGAACTTGACTTTGCCAATGTGTTGAATTGTGAAAGAAGGCCAACCATAATTGATCTCCCTCCTACCAAGTTCAATGATTCGGAGCTTGGGAAGATTCCTTCTTGCTGTAGGAATGGTACTATTTTGCCACCATCCATGGATCCTAGTATGTCAATATCTAGATTCCAAATGCAGGTCTTCAAAATGCCCCCGGCACTTAATAGATCGCAGCTTTCTCCTCCGCAGAACTGGAAGATTAGTGGTACACTCAACCCTAACTATAAGTGCGGTCCTCCTGTTAGAGTGAGTCCTACTGAGAATCCTGATCCATCAGGCTTACCATCTAACAAGACTGTAATGGCCAGTTGGCAGGTTGTGTGCAACATAACAAAGGCCAAGGGAACACCAAGTAAATGCTGTGTCTCATTTTCAGCTTATTACAATGAGTCAGTTATGCCATGCAAAACCTGTGCATGTGGGTGCCCAAAGAACACAGGAAGAACATGCAGTACTACTGCACCAGCTATGTGGCTTCCACCAGAGGCACTTCTTGTTCCTTTCGAGAACCGAACTGCCAAGGCTCTTGCTTGGGCTAGTCTGAAACATCTACCAGTGTCAAACCCCTTGCCCTGTAGTGATAACTGTGGTGTGAGCATCAATTGGCATTTATATACAGACTATAGTAAAGGATGGAGTGCAAGGGTCACACTTTTCAATTGGGGTGAAATTAATTTTGTAGACTGGTTTGCTGCAGTGCAAATGGACAAAGCAGCTGCAGGTTTTGAGAAAATGTATTCATTCAATGCAAGCACCCTTGATATAGATGGAGTGAATAATACAATAATCATGCAAGGTTTGCCGGGATTGAACTACCTTGTAGCAGAAGCAGATGGAGCTGACCCTCTCAGAGATCCTAGGGTGCCCGGTAAACAACAGTCAGTGATCTCATTCACAAAGAAAACTACTCCTGGAATCAATGTAGCTCGTGGAGATGGGTTTCCCACTAAAGTCTTTTTCAATGGGGAGGAATGCTCGCTTCCTTCAGTGTATCCAAGCAACAGTGGTTTCAGGAAGGATTTTTCCTGGGCTACTTCGATGCTCCTAACATTGTTGCTGATCTTCTTGATGCGGTAA 1950 0.4687 MWVSQLRSQCCFGIIITVLAIFLSTTSFSDAQSCNGILLSYSYTGGQRLPPNVSDTAKQPYRFESTVTVLNNGLDELKSWKVFVGFQHDEFLVSASNAILADGTTLPAAVGNGTIFAGYPMTDLKTAVETAGDLTQMQVQIDLVGTVFGVAPRSVPMPSSINLANDGFICRKSTGGGKNATNVCCTKDPKFKTNITTDEEFLPRQNGDLTLMYDVIRTYDSNYWAEVTIANHNPLGRLDNWRLSWDWMNDEFIFSMKGAYPSVVDASDCIFGKQGTYYKELDFANVLNCERRPTIIDLPPTKFNDSELGKIPSCCRNGTILPPSMDPSMSISRFQMQVFKMPPALNRSQLSPPQNWKISGTLNPNYKCGPPVRVSPTENPDPSGLPSNKTVMASWQVVCNITKAKGTPSKCCVSFSAYYNESVMPCKTCACGCPKNTGRTCSTTAPAMWLPPEALLVPFENRTAKALAWASLKHLPVSNPLPCSDNCGVSINWHLYTDYSKGWSARVTLFNWGEINFVDWFAAVQMDKAAAGFEKMYSFNASTLDIDGVNNTIIMQGLPGLNYLVAEADGADPLRDPRVPGKQQSVISFTKKTTPGINVARGDGFPTKVFFNGEECSLPSVYPSNSGFRKDFSWATSMLLTLLLIFLMR* 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04935 649 PANTHER COBRA-LIKE PROTEIN 7 28 648 - -
Rops2g04935 649 Pfam COBRA-like protein 223 402 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04935 Rops-Chr2 88776886 88779291 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04935 34 633 COBRA Gene Family AT4G16120 68.106 0.0 882
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04935 - - gmx:100803929 1194.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g04935 2 88776886 88779291 Rops2g04935 2 88776886 88779291 ECH
Rops2g04935 2 88776886 88779291 Rops11g01501 11 22652640 22653215 PCT