Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04918 ATGGCTTCAACAGATATCAGAGACATCTTAACAGCTTTCAATCCTTCACTCGACTTGTTCGCCATCACCACCGGAGACGGTCGCGTTAAGATATGGGACACGCTGAAGGGTCAGGTTCAGACCGAGTTTGCAGACATTGCATCAACTCATGCAACCACTTTATATGATAGTTCCATGAAGGGCCATCTTTCTGTTGATTATACTTGCATCAAGTGGTTGTCTTTTGATAGAAAGAGGAAAAGGAAGCATACATTCTCATTGTTGGTGCTTGGAACGGGTAGTGGTGATGTTGTAGCATTCGACGTGGCTGCCGGTCAATTGAATTGGAAAATTAGTGACTGTCATCCTGGTGGAGTAAGAGCCATTTCATCTGCAGTGAATGGATCAAACATTTATACTGCAGGTGCAGACGGGATGATATGCACAATAGATTTCATGACAGGAAACCTGCTGGAGAAGTTTAAAGCTTCTTCAAAGGCAGTTTCCTGTATGTCTGTTTCTTCGGATGGGAAGATGTTAGCTACTGCAGCAGCACAATTGAAGATTTTTAACTGTTCTGATCACAAAAAGATTCAAAAGTTCTCTGGTCATCCTGGATCCGTTCGATGTATGATCTTCACTGAAGATGGCAAGTATATTCTCTCGTCTGCTGTTGGTGAAAGATATGTTGCTTTTTGGAAGATAGATGGAGCTAAAAAACAGTCAGCTAGTTGTGTTCTTTCAATGGAGCACCCTGCTGTCTTTCTCGATAGCAGGTGTGTTGATAGAGGGGAACATGATGAGGCTGGCATATGTGTTTTAGCCATATCAGAAGTTGGTCTTTGTTATTTATGGTTTGGAAATAGTATTGAAGAACTACGTAATGCAAAACCCACAAAAATATCATTATCTTTAGAAGACATATCGTCCAAAAGTTACAAGGGAGCTCTTCCTGCAATATATGCTGCAAAATTACAAGGCATCCAGAAACCGGCTTTTGGGCAGGTTTTTCTTGTTTATGGGTTGCTTGTAAAACCATCATTTCAAAAGATTCTAGTACATTCTGGTGCAGATGTAAAGTTGAATGTATCTCATGATGGTGTTCTTCTTCCAATGAGTCAATCTCTTGTCAAATCTAAGAAGGGGAGACATGTACAAAGAGTTACTGCACTAGACCGTGCTAATGCTGAGGATGCCTTGCTTCCAATTCCTAAGGTTTTTGATTCTCATGAGAAAGAGAAAGCATTTCAAGAATCTTTGGACAAAGATGTAATAATTGATTTGCATAGAAGTAAGAAAGCTGATTCTCTTGAGATAGAAGATGATATGGTCCAAAGTGAGATTGATGTAATTTGCATTGAGGACAGGATGAAATCACTAGGGCTGCTTTACAGTGAAAGTGAATGTACATCAAACTTTGAACTTTGTTCTACATTGTTAAAGGGTATTGATCTGGAAGCTACCCTTCCAATGAAAAAGATAAGAGCAGCTGTTTTGTCTATGGTTCCAAGCGAAGCATTCAAACTACTGGAAGTGTTGTTGGCTACATGGCAATCAAGGCCATCTAGTGGAAAGTACGTTCTTCCATGGATATATAGCATATTAGTAAATCATGGTCACAATGTCATTGCTCAGGAATCTGTGACACAAATGCTTAATTCCTTATACAAGATTACTAATTCTAGAGGGGCAGCTCTTCAGCCTTTATTACAATTATCAGGTCGTCTACAACTGGTGATGTCGCAGATTGACAAGGCTTCTCAGGCAACAAGTCATTCAGGGCATGATCACCAAACGGAAGAAAGTGGAGATGAGGATGAATATTATCATGAGGAAGAAGATGATGCATCTGAAATAAGTAGTGATGATGATAGCTAG 1857 0.3996 MASTDIRDILTAFNPSLDLFAITTGDGRVKIWDTLKGQVQTEFADIASTHATTLYDSSMKGHLSVDYTCIKWLSFDRKRKRKHTFSLLVLGTGSGDVVAFDVAAGQLNWKISDCHPGGVRAISSAVNGSNIYTAGADGMICTIDFMTGNLLEKFKASSKAVSCMSVSSDGKMLATAAAQLKIFNCSDHKKIQKFSGHPGSVRCMIFTEDGKYILSSAVGERYVAFWKIDGAKKQSASCVLSMEHPAVFLDSRCVDRGEHDEAGICVLAISEVGLCYLWFGNSIEELRNAKPTKISLSLEDISSKSYKGALPAIYAAKLQGIQKPAFGQVFLVYGLLVKPSFQKILVHSGADVKLNVSHDGVLLPMSQSLVKSKKGRHVQRVTALDRANAEDALLPIPKVFDSHEKEKAFQESLDKDVIIDLHRSKKADSLEIEDDMVQSEIDVICIEDRMKSLGLLYSESECTSNFELCSTLLKGIDLEATLPMKKIRAAVLSMVPSEAFKLLEVLLATWQSRPSSGKYVLPWIYSILVNHGHNVIAQESVTQMLNSLYKITNSRGAALQPLLQLSGRLQLVMSQIDKASQATSHSGHDHQTEESGDEDEYYHEEEDDASEISSDDDS* 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04918 618 Pfam WD domain, G-beta repeat 190 226 IPR001680 GO:0005515
Rops2g04918 618 PANTHER OS03G0300300 PROTEIN 3 617 - -
Rops2g04918 618 MobiDBLite consensus disorder prediction 598 618 - -
Rops2g04918 618 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 12 231 IPR011047 -
Rops2g04918 618 SMART WD40_4 187 227 IPR001680 GO:0005515
Rops2g04918 618 SMART WD40_4 104 144 IPR001680 GO:0005515
Rops2g04918 618 SMART WD40_4 147 184 IPR001680 GO:0005515
Rops2g04918 618 SMART WD40_4 2 33 IPR001680 GO:0005515
Rops2g04918 618 MobiDBLite consensus disorder prediction 580 618 - -
Rops2g04918 618 MobiDBLite consensus disorder prediction 583 597 - -
Rops2g04918 618 Pfam Dip2/Utp12 Family 483 573 IPR007148 -
Rops2g04918 618 Gene3D - 4 142 IPR015943 GO:0005515
Rops2g04918 618 Gene3D - 143 278 IPR015943 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04918 115 228 U-box Gene Family AT2G33340 28.814 4.55e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04918 K14546 - gmx:100784148 955.281