Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04913 ATGGGGAGAATGGGACAAGAATCAGATTCCAAGACCAAGTTGGTATTAGAGATTTGCTCCATTTCCACACGTTCTGCGGTGTGTGCTCACAGGCTTGTCTCAAACCCAGCTAAGGCAACTTTCATTGACTGGTATTGCATTCTTGGAGTGGAAGAAAATGCAGGGGTAAATGCCATTCGCAAACGATACCATAAACTGGCCTTGCAACTTCATCCAGACAAGAATAAACATCCAAAAGCTGAAATTGCTTTCAAGCTTGTTTCTGAGGCATATACATGTCTGTCTAATGCAGTAAAGAGAAAAGCCTTTGACTTAGAGAGGTGCAAGCATTTCTGCTTAGAGTGCAAAAGAATCCCATATACATCAGGCAATGTCCCTGGCAATTCCAGCGGTTCAGGTTTCAAGGCATGGAATATTATCAGCTGGTCAAGATCTTATAAACTTTGGAAAAATATTAGGGACATGAGAGACAGATTTAAGGAGGAAGCTAAGGTGATAGAGAACTGTTTGAGAGTAAATTCAATGTCAAGGAAAGAATCTCCACTCTACAATCCGGTTGGCTATCTACATAGAAGCAAGTCACTGCATAAATTTGAGAAAGAAACCCCTGTTTTCAATCCATCAGACTACTTGTACCAAGGCTACCCTCACCTGAGGAGCCATGTTTACAAGAATCCTTCAACATTTTGGTACTTGCAGACAACTAGTATGCTGCACAATCAAAAGGGAGGAGCGCAGCTTGGCTCCCCCGTTTTTGAGGTCAAAGCAAAGAGTATGTTTACAAGCAAATTTGCTTTTGTCCCATCACAATGTTAG 816 0.4179 MGRMGQESDSKTKLVLEICSISTRSAVCAHRLVSNPAKATFIDWYCILGVEENAGVNAIRKRYHKLALQLHPDKNKHPKAEIAFKLVSEAYTCLSNAVKRKAFDLERCKHFCLECKRIPYTSGNVPGNSSGSGFKAWNIISWSRSYKLWKNIRDMRDRFKEEAKVIENCLRVNSMSRKESPLYNPVGYLHRSKSLHKFEKETPVFNPSDYLYQGYPHLRSHVYKNPSTFWYLQTTSMLHNQKGGAQLGSPVFEVKAKSMFTSKFAFVPSQC* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04913 271 ProSiteProfiles dnaJ domain profile. 43 107 IPR001623 -
Rops2g04913 271 CDD DnaJ 43 96 IPR001623 -
Rops2g04913 271 Pfam DnaJ domain 43 104 IPR001623 -
Rops2g04913 271 SUPERFAMILY Chaperone J-domain 33 106 IPR036869 -
Rops2g04913 271 SMART dnaj_3 42 99 IPR001623 -
Rops2g04913 271 FunFam Chaperone protein dnaJ 49 isoform A 42 165 - -
Rops2g04913 271 Gene3D DnaJ domain 42 164 IPR036869 -
Rops2g04913 271 PANTHER BNAC03G44070D PROTEIN 24 231 - -
Rops2g04913 271 PRINTS DnaJ domain signature 63 78 IPR001623 -
Rops2g04913 271 PRINTS DnaJ domain signature 79 99 IPR001623 -
Rops2g04913 271 PRINTS DnaJ domain signature 45 63 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04913 Rops-Chr2 88530844 88532070 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04913 4 104 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 33.333 2.64e-10 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04913 - - gmx:100801809 459.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g04913 2 88530844 88532070 Rops2g04913 2 88530844 88532070 ECH
Rops2g04913 2 88530844 88532070 Rops11g01516 11 22780999 22782122 PCT