Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04911 ATGGTTCATTTTCCATCTTTTGTCAATGGATTGGTGAGAACCGTGTCAATCAAGAAAGAAAAGAATTGTCGAAAAGATGATAAAAGGAAAGCTGTGGAAGAATTGGCAAAGGAAGCAAGGAAGAATGAATTGTTATTGAGTTCATCTGGAGTTGTTAAGTCCCCTAAGGCCAACAGTTTTGCTTCTGTGTTCACTAATAAGGGCCAGAAAGGAGTCAACCAGGATTGTCTTCTTGTTTGGGAGGAATTTGGTTGCCAACAAGACATGATGTTCTGTGGAGTTTTTGATGGGCATGGCCCTTGGGGTCACTTTGTAGCCAAAAGGGTCAGGAAACTAGTACCAGCCTTTTTGCTATGCAATTGGCAGGAAAATCTGGCTACAACATCACTTGACCTGGATTTTAAGATGGAAACAGACCGAAATATCCATGGACTGGACATATGGAAGCAATCCTACATAGAGACTTGTGCTGCTGTTGATCAGGATCTGAAGCAGCACACTGGGATTGATTCCTTTCTAAGTGGCACTACAGCTTTGACAATTATCAAACAGGGAGAAAATCTTATTATAGCAAATGTAGGTGACTCTAGAGCCGTCTTGGCAACAAATTCAGAGGATGGCACATTAACTCCACTTCAGCTTACCACTGACTTCAAACCAAACTTACAACAGGAGGCGCAGCGCATAAAAAAATCCAGAGGGCGTGTATTTTGTTTGGAAGATGAACCAGGAGTGTACAGGATCTGGATGCCAAATGGTAAAACACCAGGACTTGCAATATCTAGAGCTTTTGGTGACTATTGTATGAAGGACTTTGGACTAATCTCTGTGCCAGATGTGACACAAAGAAAACTTACCACCAGGGATCAATTTATCATCTTAGCAACAGATGGGGTATGGGATGTTATATCCAACCAAGAAGCAGTGAAGATTGTTTCTACAACTCCACATAAAGAAAAAGCAGCTCAAAGGCTTGTGAAATGTGCCATACATGAATGGAAACGAAAGAGAAGTCGCATTGCTATGGATGATATGTCAGCTATTTGCCTCTTCTTTCACTCTTCCTCTTCTCATCAACTCCCAGCCACTAAAGTTGTTGATTAA 1104 0.4149 MVHFPSFVNGLVRTVSIKKEKNCRKDDKRKAVEELAKEARKNELLLSSSGVVKSPKANSFASVFTNKGQKGVNQDCLLVWEEFGCQQDMMFCGVFDGHGPWGHFVAKRVRKLVPAFLLCNWQENLATTSLDLDFKMETDRNIHGLDIWKQSYIETCAAVDQDLKQHTGIDSFLSGTTALTIIKQGENLIIANVGDSRAVLATNSEDGTLTPLQLTTDFKPNLQQEAQRIKKSRGRVFCLEDEPGVYRIWMPNGKTPGLAISRAFGDYCMKDFGLISVPDVTQRKLTTRDQFIILATDGVWDVISNQEAVKIVSTTPHKEKAAQRLVKCAIHEWKRKRSRIAMDDMSAICLFFHSSSSHQLPATKVVD* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04911 367 Gene3D - 48 355 IPR036457 -
Rops2g04911 367 FunFam Probable protein phosphatase 2C 34 51 354 - -
Rops2g04911 367 Pfam Protein phosphatase 2C 84 331 IPR001932 -
Rops2g04911 367 CDD PP2Cc 60 352 IPR001932 -
Rops2g04911 367 SUPERFAMILY PP2C-like 55 353 IPR036457 -
Rops2g04911 367 Coils Coil 18 38 - -
Rops2g04911 367 SMART PP2C_4 51 350 IPR001932 -
Rops2g04911 367 PANTHER PROTEIN PHOSPHATASE 41 350 IPR015655 GO:0004722|GO:0006470
Rops2g04911 367 ProSiteProfiles PPM-type phosphatase domain profile. 60 352 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04911 Rops-Chr2 88507306 88510203 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04911 1 353 PP2C-type Phosphatase Gene Family AT3G05640 60.282 1.56e-165 465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04911 - - gmx:100817397 670.233