Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04910 ATGCATAGCCCAAAAGAGGTTCATTTGCAAGCTGCACACAGAGTTTTACAGTATCTTAAAGGAACTCCAGGGAGAGGAATTCTGTTCAAGCGGAATGGGAATGTGAATCTTGAGGCCTATACGGATGCTGACTATGCAGGATCAATTATGGATAGAAGGTCAACTACAGGATACTGCACCTTTCTTGGAGGAAATCTCGTGTCTTGGAGAAGTAAAAAGCAAAGTGTAGTAGCTCGGTCTAGTGCTGAAGCAGAATTCCGAGCCATGGCACAAGGTGTATGTGAGCTGCTATGGCTTAAAATCATTTTGGAGGATTTGAGAATAAAATGGGAAGAACCAATGAGGCTCTATTGTGATAATAAATCAGCAATCAACATAGCCCATAACCCGGTGCAGCATGATAGAACTAAACATATTGAAATAGACAGGCACTTCATCAAAGAAAAACTTGATAGTGGCTTGATATGCACTCCATACATGTCCTCTCAAGGCCAACTCGCAGATATTCTCACCAAAGGACTGAACAGCCACAATTTTGAAAAGATTATTTACATTCTTCTTTACAAAGAGGTGGCACTTGCTTTGAAAATCAACAGTGATTATAGCAAGAGAAAGCTTCTTAGCATTCATGAGAATGTGAGGGTATTACGCTATCCTAACCACTTTTCTGCTGGCATTTACCTGTGGTCGCACCATGAAAAACTTGTCATTATTGATCACCAGATTTGCTTTATTGGAGGACTAGATTTGTGCTTTGGTCGTTATGACACACATGAACATAAAGTGGGGGATTTCCCTCCGCTGATCTGGCCTGGAAAGGACTATTATAACCCTAGGGAATCTGAACCAAATTCATGGGAAGATACAATGAAAGATGAATTGGAACGTCGAAAATATCCTCGCATGCCATGGCATGATGTTCATTGTGCCCTTTGGGGGCCACCTTGTCATGACATAGCTAGGCACTTTGTTCAAAGATGGAATTATGCGAAGAGGAACAAAGCTCCAAACGAGCAAGCAATACCATTACTTATGCCTCAGCATCATATGGTTATTCCACATTACATGGGAAGAAGCAGAGAGGTGCAGATTGAAAGCAAGAGGAATGATAATTATAGAGCCATCAACAGGGAAGATTCCTTTTCTTCATCATCCCAAGATATTCCTCTACTTTTGCCTCAGGAGTCTGCTGGAGTAGATACTTCAGAAGGAGACCCAAGATTGAATGGGTTAAACTCCTTTCCACATCTCCTTGACCAGCCAAGCAGGGTCAGCAGCAGTCTTCCTTTTTCATTCTGGAAAACCAAAATTGAATCAGTAGGTCCAGATGTACCAAAGAAGGGTTTTGTAGACAATCTTGACAATGTGGATTATCATGGGAAAATGTCTCTGGATAAAGTATCTCATGTTGATATACAAAGTACAGATCCAGAATGGTGGAAAACACCAGAACATGGTGATCATGGAGGTTTTGCAGATGGATCAGGACAAGTTGGTCCTCGTGTTTCCTGCCGTTGTCAGGTTATTAGGAGTGTCAGTCAATGGTCCGCTGGAACAAGCCAAACCGAAGACAGCATCCACAATGCTTATTGCTCTCTTATTGAGAAAGCAGAATACTTCATATACATTGAGAATCAGTTTTTTATCTCAGGTCTTTCAGGAGATGAGATAATACGAAATCGTGTGTTAGAAGCTTTATATCAACGGATTATGCGAGCTTACAATGAAAATAAACCTTTCAGGGTTATAATTGTCATACCTCTCTTGCCTGGCTTCCAGGGTGGCCTGGATGATAGTGGTGCGGCATCTGTGAGAGCCATAATGCGTTGGCAGCATCGAACCATTTGCAGAGGACAGAATTCTATAATACATAATCTATATGAATTTCTTGGTCCAAGAATTCATGATTACATTTCATTCTACGGTCTCAGGGCTTATGGTAGACTCTTTGATGGTGGTCCCATGGCAACCAGCCAGGTGTATGTTCACAGTAAAATCATGATTATTGATGATTGTACATGTTTGATTGGATCTGCTAATATTAATGATAGGAGTTTACTTGGCTCCAGAGATTCTGAGATTGGTGTAATTATAGAAGATGGGGAATTTGTTGGTTCTTATATGGATGGAAAGCCTTGGAAGGCAGGAAAATTCTCTCTGACTCTGCGATTGTCATTATGGTCTGAGCATTTAGGTCTCCAAGCAGGAGAGGTCAATCGAATAATGGACCCGGTTGTTGAGTCTACTTACAAGAATATTTGGATGGCAACAGCGAAGACAAATACCGCAATTTACCAGGATGTGTTTTCTTGCGTACCTAATGATCTGATACACACCAGATTTGCTTTCAGGCAAAGCGTAGCTTTTTGGAAAGAAAAAGTGGGTCATAATACCATTGATTTAGGAATAGCCCCAAAAAAGTTAGGAACTTATGATAATGGAGGTATTAAGAACATTGATCCCCTGGATAGATTAGCATTGGTGAAGGGTCATCTTGTTTCTTTACCCCTGGAGTTCATGAGCTTAGAAAATCTTAAACCTGCTTTTAATGAGGGCGAGTACTACGCTGCTCAAGTTTTCCATTGA 2586 0.4103 MHSPKEVHLQAAHRVLQYLKGTPGRGILFKRNGNVNLEAYTDADYAGSIMDRRSTTGYCTFLGGNLVSWRSKKQSVVARSSAEAEFRAMAQGVCELLWLKIILEDLRIKWEEPMRLYCDNKSAINIAHNPVQHDRTKHIEIDRHFIKEKLDSGLICTPYMSSQGQLADILTKGLNSHNFEKIIYILLYKEVALALKINSDYSKRKLLSIHENVRVLRYPNHFSAGIYLWSHHEKLVIIDHQICFIGGLDLCFGRYDTHEHKVGDFPPLIWPGKDYYNPRESEPNSWEDTMKDELERRKYPRMPWHDVHCALWGPPCHDIARHFVQRWNYAKRNKAPNEQAIPLLMPQHHMVIPHYMGRSREVQIESKRNDNYRAINREDSFSSSSQDIPLLLPQESAGVDTSEGDPRLNGLNSFPHLLDQPSRVSSSLPFSFWKTKIESVGPDVPKKGFVDNLDNVDYHGKMSLDKVSHVDIQSTDPEWWKTPEHGDHGGFADGSGQVGPRVSCRCQVIRSVSQWSAGTSQTEDSIHNAYCSLIEKAEYFIYIENQFFISGLSGDEIIRNRVLEALYQRIMRAYNENKPFRVIIVIPLLPGFQGGLDDSGAASVRAIMRWQHRTICRGQNSIIHNLYEFLGPRIHDYISFYGLRAYGRLFDGGPMATSQVYVHSKIMIIDDCTCLIGSANINDRSLLGSRDSEIGVIIEDGEFVGSYMDGKPWKAGKFSLTLRLSLWSEHLGLQAGEVNRIMDPVVESTYKNIWMATAKTNTAIYQDVFSCVPNDLIHTRFAFRQSVAFWKEKVGHNTIDLGIAPKKLGTYDNGGIKNIDPLDRLALVKGHLVSLPLEFMSLENLKPAFNEGEYYAAQVFH* 862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04910 861 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 658 685 IPR001736 GO:0003824
Rops2g04910 861 SUPERFAMILY DNA/RNA polymerases 6 141 IPR043502 -
Rops2g04910 861 Pfam PLD-like domain 531 705 IPR025202 -
Rops2g04910 861 Gene3D Endonuclease Chain A 494 718 - -
Rops2g04910 861 SMART pld_4 227 254 IPR001736 GO:0003824
Rops2g04910 861 SMART pld_4 658 685 IPR001736 GO:0003824
Rops2g04910 861 CDD RNase_HI_RT_Ty1 38 176 - -
Rops2g04910 861 SUPERFAMILY Phospholipase D/nuclease 155 347 - -
Rops2g04910 861 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 227 254 IPR001736 GO:0003824
Rops2g04910 861 FunFam Phospholipase 492 712 - -
Rops2g04910 861 Pfam Phospholipase D Active site motif 227 254 IPR001736 GO:0003824
Rops2g04910 861 Gene3D Endonuclease Chain A 162 353 - -
Rops2g04910 861 PANTHER PHOSPHOLIPASE D 183 851 IPR015679 -
Rops2g04910 861 SUPERFAMILY Phospholipase D/nuclease 499 708 - -
Rops2g04910 861 CDD PLDc_vPLD1_2_yPLD_like_2 518 702 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04910 Rops-Chr2 88495578 88505221 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04910 183 861 Phospholipase D Gene Family (Wang group) AT3G05630 59.475 0.0 810
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04910 K01115 - gmx:100780514 1197.96