Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04909 ATGAAATCGGAGCCATGTTTCCGGCAGCAAGAGTCCACTCGGATTTTCGACGAGTTACCGGAAGCCACCATTGTCTCCGTCTCTCGCCCCGAAATCAGCCCCATGCTCCTCACTTACACCATTCAGTTTCATTACAAACAGTTCAAGTGGCAGCTTGTCAAGAAAGCTTCTCAAGTATTTTATTTGCATTTCACGTTAAAGAAGCGCACATTCATTGAGGAAATTCATGAGAAGCAAGAGCAAGTTAAAGAATGGCTTCAAAATCTAGGAATAGGAGAACACACGCCTATGGTACAAGATGATGATGATGATGATGAAGATGATGATGAAACCATTCTTTCACCTCATCATGATGAAAGTGCTAAAGACAGAGATATTCCATCTAGTGCTGCTCTATCAATTATACGGCCAGCCTTAGGAAGACAGCGGTCGATAACAGGCAGGGCAGCAAAGATTGCAATGCAGGGTTATCTGAATCACTTTTTGGGAAATATCAGTATTGTTAACTCTCGAGAGGTTTGCAAGTTTTTGGAGGTATCAAAGTTATCTTTTTCACCTGAATATGGCTCTAAGCTGAAGGAAGAATATGTGATGGTGATGCATCTGCCTAAAATTCCAAAGCATGATGGTTCCAGAAAGTGTTGTATGTCTGACTGTTTTAGTTGTTGTAACGATAATTGGCAAAAGGTTTGGGCCGTACTGAAACCTGGATTCTTGGCATTGTTGGCAGATCCTTTTGATGTGCAACCTTTGGACATTATTGTTTTTGATGTACTACCTACCTCAAATGGGAATGAGGATGGTCGTCTATCACTAGCAAAGGAAATGAAGGAACGAAATCCTTTACGTCATTCATTCAAGGTGACTGGTGGAAACCGGAGCATCAAAGTTAGAGTGAAAAGCAGTGGTAAAGTTAAAGATTGGGTTGCTGCAATCAATGATGCTGGACTTAGATCTCCTGAAGGATGGTGTCATCCCCACCGCTATGGTTCTTTTGCTCCTCCAAGAGGCTCAATTGAAGATGGTAGTCAGGCCCAGTGGTTTGTAGATGGACGAGCTGCATTTGAGGCCATTGCTTCTTCAATTAAGGATGCAAAAGCAGAGATATTTATTTGTGGTTGGTGGCTGTGCCCGGAACTATATCTACAGCGTCCTTTTCACAGTCATGCTTCATCAAGGCTTGATAATTTGCTGGAAGCAAAAGCTAAGCAAGGGGTTCAGGTAATCTTTAATGTGAAATCTTTCAGTCGTCCCCTTTAA 1260 0.423 MKSEPCFRQQESTRIFDELPEATIVSVSRPEISPMLLTYTIQFHYKQFKWQLVKKASQVFYLHFTLKKRTFIEEIHEKQEQVKEWLQNLGIGEHTPMVQDDDDDDEDDDETILSPHHDESAKDRDIPSSAALSIIRPALGRQRSITGRAAKIAMQGYLNHFLGNISIVNSREVCKFLEVSKLSFSPEYGSKLKEEYVMVMHLPKIPKHDGSRKCCMSDCFSCCNDNWQKVWAVLKPGFLALLADPFDVQPLDIIVFDVLPTSNGNEDGRLSLAKEMKERNPLRHSFKVTGGNRSIKVRVKSSGKVKDWVAAINDAGLRSPEGWCHPHRYGSFAPPRGSIEDGSQAQWFVDGRAAFEAIASSIKDAKAEIFICGWWLCPELYLQRPFHSHASSRLDNLLEAKAKQGVQVIFNVKSFSRPL* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04909 419 SUPERFAMILY Phospholipase D/nuclease 300 410 - -
Rops2g04909 419 MobiDBLite consensus disorder prediction 93 124 - -
Rops2g04909 419 PANTHER PHOSPHOLIPASE D 126 410 IPR015679 -
Rops2g04909 419 SUPERFAMILY PH domain-like 223 315 - -
Rops2g04909 419 ProSiteProfiles PH domain profile. 226 317 IPR001849 -
Rops2g04909 419 SMART PH_update 191 319 IPR001849 -
Rops2g04909 419 Coils Coil 68 88 - -
Rops2g04909 419 CDD PH_PLD 168 315 - -
Rops2g04909 419 Gene3D - 208 316 IPR011993 -
Rops2g04909 419 MobiDBLite consensus disorder prediction 98 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04909 Rops-Chr2 88476291 88481294 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04909 10 408 Phospholipase D Gene Family (Wang group) AT3G16785 73.697 0.0 569
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04909 K01115 - gmx:100780514 675.241