Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04906 ATGAATTCAAATTATGGAAAATCCAACCCTCAAAAATCTTCCTCTGTTTCACTCAACAACTTCAATTTCGATTTCGATATTGGCATCGGATCCAATCGACCCAAATCCCTAAACGATCAGAAAAACCCCAATCCCTCTTCCTATTCCTATTCCTATTCCCATTCCAATTCCACCACTTCGTATTCCTCTTCACAATCCAAGAAACCATCATGGACCCACCAACCCGCTCCGACCCAAACCGTGTTGCCGGGTCAACCGGCTTCGATGGTCGGTGACATCTTCGGCAAGAGTTGGGGATCCACTCAACCTTCGGGTCCTGGAATTGGGATTGTTAATAAGAACACTAATCTCTTTGGTGATTTGGTGAGCTCTGCTTTGGGGCAGGGTTCTAAGACTACTTCTTCTTCTTCCAATGTTCCTCTGAAAAATGCAACTCCCACGCCCAACAAGACCTCATTTTCAATGGGAAACATGGCCAATTCTTTGCCTAAAACTGGTAACAACACACCACAAAGTAGTGCTACTACTTGGGGATCTTCTGGGAATTTCAGTATGAATTCCAATAAAAGCCCCAATCTTGGGGTTCCTTCAATGAGAAATATGGGTGGTGGTGGTGCAACTGTAAGTGGAATCAGTTCTAACAATAACAAAGATCCATTCAGTTCTTTGTCTGGTATTGGATCCAAGCAATCTGCTAGTCTTAATTCAGCTGCTAAACCCCAAAAGATTGATTCAAATGATGATGGTTTTGGAGATTTTCAGAATGCTTCCAAACCTAGCTCTACAGCATTTCCATCAAGTGGAACTGCAGGGACTAATGTTGATTTTACTGGATCTACGGCTTCGAATCAGACCCCTCCTGTCCAGGGTGGTGATCCAATGGATATGTTTTTTACATCATCTTCATCAGCCTCAGGTGGAGGTGGTGCTGCTGGGTCCTCTCAAGGATTTGGAGCACAACCCTCTTCTGAAATGGATGATTGGGGTTTGGATTCTGAGTTTGGTGGTGGAGGCCATGATGTGGGTGGCACTATTGAGCTTGAAGGGCTTCCACCTCCTCCTGCTGGGGTATCAGGTTCCACTGCCAAAGGCAAAGGGATGGATAATTACAAGCAGGGACAATTTGCCGATGCTATTAAGTGGCTTTCTTGGGCTGTCATCCTTCTAGAGAAATCTGGGGATAATGCCGGCACAGTGGAGGTTTTGTCATGCAGGGCTTCTTGTTACAAAGAAGTTGGAGAGTATAAAAAGGCAGTGGCGGATTGTACAAAGGTTCTTGAAAACGATGAAACCAATGTATCTGTCCTGGTACAGCGTGCTCTCTTGTATGAGAGTATGGAAAAGTACAAACTTGGTGCTGAAGACCTGAGGACTGTGCTGAAGATTGATCCTGGGAATAGGATTGCAAGAAGTACCGTTCACCGGTTGGCTAAGATGGCCGATTAA 1446 0.4502 MNSNYGKSNPQKSSSVSLNNFNFDFDIGIGSNRPKSLNDQKNPNPSSYSYSYSHSNSTTSYSSSQSKKPSWTHQPAPTQTVLPGQPASMVGDIFGKSWGSTQPSGPGIGIVNKNTNLFGDLVSSALGQGSKTTSSSSNVPLKNATPTPNKTSFSMGNMANSLPKTGNNTPQSSATTWGSSGNFSMNSNKSPNLGVPSMRNMGGGGATVSGISSNNNKDPFSSLSGIGSKQSASLNSAAKPQKIDSNDDGFGDFQNASKPSSTAFPSSGTAGTNVDFTGSTASNQTPPVQGGDPMDMFFTSSSSASGGGGAAGSSQGFGAQPSSEMDDWGLDSEFGGGGHDVGGTIELEGLPPPPAGVSGSTAKGKGMDNYKQGQFADAIKWLSWAVILLEKSGDNAGTVEVLSCRASCYKEVGEYKKAVADCTKVLENDETNVSVLVQRALLYESMEKYKLGAEDLRTVLKIDPGNRIARSTVHRLAKMAD* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04906 481 SMART tpr_5 399 432 IPR019734 GO:0005515
Rops2g04906 481 SMART tpr_5 433 466 IPR019734 GO:0005515
Rops2g04906 481 SMART tpr_5 359 392 IPR019734 GO:0005515
Rops2g04906 481 MobiDBLite consensus disorder prediction 128 195 - -
Rops2g04906 481 Gene3D Tetratricopeptide repeat domain 359 480 IPR011990 GO:0005515
Rops2g04906 481 Pfam Tetratricopeptide repeat 434 465 IPR019734 GO:0005515
Rops2g04906 481 MobiDBLite consensus disorder prediction 206 321 - -
Rops2g04906 481 PANTHER OS03G0340700 PROTEIN 1 481 - -
Rops2g04906 481 MobiDBLite consensus disorder prediction 33 85 - -
Rops2g04906 481 MobiDBLite consensus disorder prediction 128 326 - -
Rops2g04906 481 MobiDBLite consensus disorder prediction 29 101 - -
Rops2g04906 481 SUPERFAMILY TPR-like 363 471 IPR011990 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04906 374 476 Calmodulin-binding Proteins AT3G25230 32.075 7.22e-10 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04906 - - pvu:PHAVU_003G107800g 658.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g04906 2 88424162 88428710 Rops2g04906 2 88424162 88428710 ECH