Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04902 ATGGCTTTCCTCCTCCATCACCGTCTTCCGATCATCGCCGTGATCCTCCTCGTTTCCCTCTCCGCCACGGCGACGACACGCCCTTGCCGGAGTTTCATAATCTCATCTTACTCGTTCTGTAACCCTTCATCCAACACCTTCGCTACCATCACCGAGATCCGATCCCTAACCCCTCTTTATATCAACGACAAACCCTACGATATCTTCTTCAAACCGATCCACCGTGAAAATCTCCTCCAACAAATGGATCTCCGATTTTTTTTTTCCGATCCGTTTTCCTCTCTGTTTGTTCTGAGGAGGGACATCCCATGGGAGACCTACATGTCCACCAAGCTCATCTCAGGAACAAGCCTTCAACTCTTAAGGCGTTTCGATCACCGATCAGAAAGTCACAGAGCACAGTTGCTCGATGATGATGGTCCTGCTTATGTTCGTGTGTTTGTTCGTGTTTTGCGTGATATTTTCAAAGAAGACACTGTTGAGCATGTTTTGGCACTGATTGATGAAATGCTTACAGTGGGTTCACATCTTGCTTCAACCATTGATGACATATATCTGCATGTAGATAAAATATGTGCTTGTTGGGATTGTGCTTCGAAGTGA 603 0.461 MAFLLHHRLPIIAVILLVSLSATATTRPCRSFIISSYSFCNPSSNTFATITEIRSLTPLYINDKPYDIFFKPIHRENLLQQMDLRFFFSDPFSSLFVLRRDIPWETYMSTKLISGTSLQLLRRFDHRSESHRAQLLDDDGPAYVRVFVRVLRDIFKEDTVEHVLALIDEMLTVGSHLASTIDDIYLHVDKICACWDCASK* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04902 200 SUPERFAMILY ARM repeat 97 184 IPR016024 -
Rops2g04902 200 Gene3D - 94 191 IPR011989 -
Rops2g04902 200 Pfam V-ATPase subunit H 98 184 IPR004908 GO:0000221|GO:0046961|GO:1902600
Rops2g04902 200 PANTHER V-TYPE PROTON ATPASE SUBUNIT H 97 179 IPR004908 GO:0000221|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04902 Rops-Chr2 88380344 88381644 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04902 97 174 Primary Pumps ATPases(2) AT3G42050 71.795 2.57e-33 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04902 K02144 - lja:Lj4g3v0913490.1 146.362