Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04891 ATGTTTAACATAACATCAGAAAACCCTAAAACTAAAACCTTTTTTCTTTCCTTCGTTCCCCCTCTGCGCCGCTCGTTTGTTTGGACAGCCCTAGTCACCACCACCCCTCACCGTCGTCCATTGCAACCTCTCCGTCTTCACCGGTGTCGCGCCGCCATCCCCGACCCTCCCCCGCGCTCTGGACATCGAATGGGACATCTGCTCGGCTTGAAGTACGTGCTTAAGAGTGCTCCATCGTGTCTCTGTGAGGCTTTCAAGAGCAGTTCTCGGTTTGGTGTGGTCTTGAATGCTACTAAGGCTTTGACTCTTCCTGCCGCTTGCAAAGTCTCTCGCTTCTCCTTCGTGGATCGATTGTGGATATATGATCTCTTGCACAATGCACATCTTAATCTAGAAGGATTGGATGAGCTTTTTAAAGTTGCTCAGGCACTTGCTGATGGTGTAATTCCAAATGAATATGGAATTAATCCAAAGCAGAAGCTGAAGATTGGCTCAAAGTTGGGTAATTTCATTCACTACATGGCTACATTTGTTTCTGGATTTGTTGTGGGTTTCACAGCTGTTTGGCAATTAGCACTTGTTACCCTTGCTGTAGTCCCTATGATAGCTGTAATTGGAGCCATTCACACAACCACTTTGGCCAAGCTATCTGGTAAAAGCCAAGAAGCTCTTTCTCAAGCTGGCAATATTGTGGAACAGATTGTTGTTCAAATTCGAGTGGTGCTAGCATATGTTGGGGAGAGTAGAGCACTGCATGCTTACTCTTCTGCTTTGAGGATTGCCCAGAAGAGTGGCTACAAGAGTGGATTTTCAAAGGGAATGGGATTGGGGGCAACTTACTTTGTTGTTTTCTGCAGCTATGCTCTTTTGCAAGGAAGTGTATCTGAAATTGGAACTCATGATGAGCTCTTTGCAGTGGCGCCTTGCCCTTGTCCTAGTAGTTGTTTTCCCTGTTGTTGTTGCAGCCACTGTTTTGCAGAAAATGTTCATGACTGGTTTCTCTGGTGA 1008 0.4603 MFNITSENPKTKTFFLSFVPPLRRSFVWTALVTTTPHRRPLQPLRLHRCRAAIPDPPPRSGHRMGHLLGLKYVLKSAPSCLCEAFKSSSRFGVVLNATKALTLPAACKVSRFSFVDRLWIYDLLHNAHLNLEGLDELFKVAQALADGVIPNEYGINPKQKLKIGSKLGNFIHYMATFVSGFVVGFTAVWQLALVTLAVVPMIAVIGAIHTTTLAKLSGKSQEALSQAGNIVEQIVVQIRVVLAYVGESRALHAYSSALRIAQKSGYKSGFSKGMGLGATYFVVFCSYALLQGSVSEIGTHDELFAVAPCPCPSSCFPCCCCSHCFAENVHDWFLW* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04891 335 CDD AAI_LTSS 69 109 - -
Rops2g04891 335 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 163 290 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Rops2g04891 335 Pfam Histidine phosphatase superfamily (branch 2) 120 167 IPR000560 -
Rops2g04891 335 Gene3D - 69 113 IPR036312 -
Rops2g04891 335 SUPERFAMILY ABC transporter transmembrane region 164 290 IPR036640 GO:0005524|GO:0016020
Rops2g04891 335 Pfam ABC transporter transmembrane region 163 289 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Rops2g04891 335 PANTHER ABC TRANSPORTER B FAMILY 163 291 IPR039421 -
Rops2g04891 335 Gene3D ABC transporter type 1, transmembrane domain 160 299 IPR036640 GO:0005524|GO:0016020
Rops2g04891 335 Pfam Probable lipid transfer 70 110 IPR016140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04891 Rops-Chr2 88202285 88209233 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04891 163 290 Calmodulin-binding Proteins AT2G36910 85.156 2.44e-65 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04891 K05658 - pop:7486496 221.476