Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04887 ATGGGTGGCCATGTGCATCAGAGCAATGCCGCCGCCACTGCTCTGTATGACCACGCCGGCACTGGATCCCTGCACGGTGCGGCAGGGCCTGCCACCGATGCCGGCGATGCCGTCATGGCTCGCTGGTTGCAATCCGCCGGCTTGCAGCACCTGGCCTCTCCATTGGCTTCCACTGCTATCGATCAACGTCTCCTCCCCAACCTTCTCCTGCAGGGTTATGGAGCACAGTCTGCGGAAGAAAAGCAGAGGCTTTTTAAGTTAATGAGAAACCTCAATTTTAATGGAGAGTCTGGTTCAGAGCCATATACGCCCACTACCCAAACTTTAGGTGGAGTGGGTGTATCAGATGGGTTTTATTCCCCAGAGTTTAGAGGAGATTTTGGAGCTGGGCTGTTGGATCTTCATGCTATGGATGATACAGAGCTCCTGTCCGAGCATGTTACTTCAGAAGAACCCTTTGAGCCATCCCCTTTTATGCCTGGCGGTACCAGAGTATTTGAAGACGATTTCAATCCAATTAACAGCAAGCGGGAAGGAGGAGAAGAAGATGTCGTTGCATCACTTTTTTTACCGACGAATGAAAAAGAGAATAATACAAGAGAAAATAATGTTGCTAAGATTAGAGTTGTGGTACGCAAAAGACCTTTAAATAAGAAGGAGCTTGCTAAGAAGGAGGACGATATTGTATCTGTATCTGACAATGTGTATTTGTCAGTCCATGAACCCAAACTAAAGGTTGATTTGACAGCTTATGTGGAGAAGCATGAATTTTGTTTTGATGCTGTTCTTGACGAGAATGTTACCAATGATGAAGTGTATCGAGTTACTGTAGAACCAATCATTCCTACAATTTTTGAGAGGACTAAAGCTACCTGTTTTGCTTATGGTCAGACAGGAAGTGGCAAAACATACACAATGCAACCATTACCTCTCAGAGCTGTAGAAGACCTTGTTAGACAGTTGCATCAGCCAGTTTACCGAAATCAGAGATTTAAATTATGGCTTAGCTACTTTGAGATATATGGTGGAAAACTTTTTGATCTTCTTAGCGACAGAAAGAAACTCTGCATGAGAGAAGATGGCCGGCAGCAAGTTTGTATTGTAGGACTGCAAGAATTTGAAGTTTCTGATGTACAGATTGTCAAAGAATTCATTGAAAAGGGGAATGCAGCAAGAAGTACAGGATCCACTGGTGCGAATGAGGAGTCCTCCAGGTCACATGCTATCTTACAACTGGTTGTAAAGAGGCACAATGAGGTAAAAGAGAGCAAGCGGAACAATGATGGAAATGAGGCGAAAAGTGGTAAGGTTGTGGGCAAGATTTCGTTTATTGATCTTGCTGGAAGTGAAAGAGGTGCTGACACTACTGATAATGACCGTCAGACAAGGATTGAAGGAGCAGAAATCAACAAGAGCCTTTTGGCTTTGAAGGAGTGCATTCGTGCTTTGGACAATGACCAGATCCATATTCCTTTTCGTGGAAGCAAACTTACAGAAGTGCTTCGTGACTCCTTTGTTGGCAACTCAAAGACTGTTATGATCTCTTGCATATCTCCAAATTCTGGGTCTTGTGAACACACACTTAATACCTTAAGATATGCAGATCGAGTTAAAAGTCTATCCAAAAGTGGAAATCCTAGAAAGGACCAGGCCCCAAATCCATTACCACAGACAAATAAGGAGGTTCCATCCACATCATCCCTTCCGGCTAGTGTTGGTGCAGAGGATTTTAATGTTCAACGTCAAGAGGTGAAAACTGTGGATATGGGCAGGAAAGTTTTTGAAAAGGAAAATTCTTTGTATAGCTCTGCTGCTGATGTTGACAAGCAACCATCTAGTTTTTCTTCAAGTTTTCTATTTAATGGGCGAGAGGAGAAAGGGTTGGCTTCTGCCTCAATGGACAGGGACAGGTTTGAAGTGAAGAATTCTTACAATGATTCTACCAGTCAAAAGATGAACTCCCATTCCCAAAATGATATAGATGAGAAAATGCAAAAGGTGTCTCCCCCACGTAGAAAAGCACCCAAGGAGGAGAAGTTTGAAAGGCCTACAAACTGGCTAAAAAAGGATGCCAATGGTTCTGATCACTTATCCACAAGCTCCAAGCAGCAGAGCACAGGGAATTATAACACAGTTACCACTGGATCCCGGCAATCTGAAACAGAATCCTCTCCTGATGTGAATATAAGCGCAATACTTGAGGAGGAAGAAGCCCTAATTGCTGCTCATAGGAAGGAAATTGAGGACGCAATGGAGATTGTTCGCGAAGAAATGAAACTATTAGCAGAAGTGGACCAACCTGGAAGTCTTATTGACAACTACATAACCCAGTTGAGTTTTTTGCTTTCTCGCAAAGCAGCTAGTCTCGTCGGTCTTCAAGCTCGTCTGGCAAGATTTCAACATCGACTAAAAGAACAGGAGATACTAAGTAGGAAAAGAGATAATCAGATTCATGACCGCGACGAGACCCGACGGCTGGAGGAGTTGAGGAGGCGCGACGACGTGATGCAGCAGCGACGAGACCGAGGAGCTCCGATGGCGGTGACGCAACACGACGACGAATCTGGCTGGGGCGGCGGCGTTAGGGCTTGA 2592 0.4479 MGGHVHQSNAAATALYDHAGTGSLHGAAGPATDAGDAVMARWLQSAGLQHLASPLASTAIDQRLLPNLLLQGYGAQSAEEKQRLFKLMRNLNFNGESGSEPYTPTTQTLGGVGVSDGFYSPEFRGDFGAGLLDLHAMDDTELLSEHVTSEEPFEPSPFMPGGTRVFEDDFNPINSKREGGEEDVVASLFLPTNEKENNTRENNVAKIRVVVRKRPLNKKELAKKEDDIVSVSDNVYLSVHEPKLKVDLTAYVEKHEFCFDAVLDENVTNDEVYRVTVEPIIPTIFERTKATCFAYGQTGSGKTYTMQPLPLRAVEDLVRQLHQPVYRNQRFKLWLSYFEIYGGKLFDLLSDRKKLCMREDGRQQVCIVGLQEFEVSDVQIVKEFIEKGNAARSTGSTGANEESSRSHAILQLVVKRHNEVKESKRNNDGNEAKSGKVVGKISFIDLAGSERGADTTDNDRQTRIEGAEINKSLLALKECIRALDNDQIHIPFRGSKLTEVLRDSFVGNSKTVMISCISPNSGSCEHTLNTLRYADRVKSLSKSGNPRKDQAPNPLPQTNKEVPSTSSLPASVGAEDFNVQRQEVKTVDMGRKVFEKENSLYSSAADVDKQPSSFSSSFLFNGREEKGLASASMDRDRFEVKNSYNDSTSQKMNSHSQNDIDEKMQKVSPPRRKAPKEEKFERPTNWLKKDANGSDHLSTSSKQQSTGNYNTVTTGSRQSETESSPDVNISAILEEEEALIAAHRKEIEDAMEIVREEMKLLAEVDQPGSLIDNYITQLSFLLSRKAASLVGLQARLARFQHRLKEQEILSRKRDNQIHDRDETRRLEELRRRDDVMQQRRDRGAPMAVTQHDDESGWGGGVRA* 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04887 863 PANTHER KINESIN-RELATED PROTEIN 6 32 813 IPR027640 GO:0003777|GO:0007018
Rops2g04887 863 Coils Coil 789 809 - -
Rops2g04887 863 ProSitePatterns Kinesin motor domain signature. 439 450 IPR019821 GO:0003777|GO:0005524|GO:0007018
Rops2g04887 863 Gene3D Kinesin motor domain 187 543 IPR036961 -
Rops2g04887 863 ProSiteProfiles Kinesin motor domain profile. 206 540 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops2g04887 863 CDD KISc_KIF2_like 206 538 - -
Rops2g04887 863 SMART kinesin_4 204 546 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops2g04887 863 MobiDBLite consensus disorder prediction 828 848 - -
Rops2g04887 863 MobiDBLite consensus disorder prediction 544 573 - -
Rops2g04887 863 PRINTS Kinesin heavy chain signature 490 511 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops2g04887 863 PRINTS Kinesin heavy chain signature 397 414 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops2g04887 863 PRINTS Kinesin heavy chain signature 440 458 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops2g04887 863 PRINTS Kinesin heavy chain signature 287 308 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops2g04887 863 MobiDBLite consensus disorder prediction 540 579 - -
Rops2g04887 863 FunFam Kinesin-like protein 185 543 - -
Rops2g04887 863 MobiDBLite consensus disorder prediction 828 863 - -
Rops2g04887 863 MobiDBLite consensus disorder prediction 642 727 - -
Rops2g04887 863 MobiDBLite consensus disorder prediction 691 727 - -
Rops2g04887 863 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 197 540 IPR027417 -
Rops2g04887 863 Coils Coil 733 764 - -
Rops2g04887 863 Pfam Kinesin motor domain 212 539 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops2g04887 863 MobiDBLite consensus disorder prediction 656 689 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04887 Rops-Chr2 88138428 88149350 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04887 198 540 Calmodulin-binding Proteins AT5G65930 33.521 1.40e-41 163