Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04884 ATGGTAATGGATGATCCTCAATACCCAATTAACCCTCCTTCACCCTATCAACATCAACATGCGCCTCCCATTCCTAAGCCACCGTCGCAACACTCCGACAACGATCGAAGCACCACTGAGTTACGCGCTCTCGATTGTAACCTCAATTCACTTTGTGAGCATGTCCAAATCGAAGGTTTCAATTCCGGTTCTTTCTCTGACATCGTTGTCAATGCAATGGGCTCCACTTATCACCTCCACCGTCTCATCCTCTCTCGCAGTTCATATTTCAGGAACATGCTTCATGGGCCTTGGAAAGAAGCTAGTGCTCCTGTTGTGACTCTGCTTGTCGATGATAAGAATGTTAATGATGAGGCAATTGCGATGGCTTTGGCTTATCTATATGGGCACCACCCTAAGCTTAATGATGATAATGCATTTCGTGTTCTTGCTGCTGCTTCCTTTCTTGACCTTCAGGATTTATGTGCAATATGTACAGATTTCATTATATCTGAGCTGTGGACTTCAAACTTCTTGGCTTATCAGGTGTTTGCGGAGAACCAAGATTATGGCATTCACGGGGAGCGTGTTAGAACTGCTTGTTGGGGCTACCTTTGTCAAAGTGGTGGCATGGAATTGAAAGAGGTGCTTCCTAAACTTTCATCTCAAACATTGCATGCATTACTGACCTCCAATGATCTGTGGATACCCAGTGAAGAGAAGCGGTTTGAATTGGCTTTGCACACATTCCTGGCAAAAAGTGCTCACTGCAAGGTTGAACATCCTGCACATGGAATTTCTGGTTCTGAATCTGCAACTGGTATTCATTCTGATTCTGATAACACTAAGGGAAAAAGTGTAACTGATAGCTGCAATAATAAGAGGTTGGAAACTGACATAGCGAAAATGAGTCTTAAAAGTGACCCAACGGACCCCAGCACTCCTAATCTTCTAGTTGAGCTTGCAGACTCAGTGGCAGACTTAAAAAATGAGGTTTCTGATTCCAATCAACAGGTTCAACAAGCTTCATATGTCAGTTCACCAAACCTGAATCGAGGATATCCTTGTGACATGGAAGGACCTTCATTGGGTAATTCGTTGTCTGGTACAGATGGAAGAACCTCATGTTATGTTGAGGTGCCTCTTGGTGCTGGAGCAACTGGTTTTGGAACAGCTGGAGTGGGTATTGAAGGGCCATCTGAGGAAGGATCTTGCTACCATTTGGATAACAATAGTTGGTTAGTCAGGGATCAATCAAGACAATGTTTTTCAACGAATTCATGTAATGGTTTCACATCCAGTGATTGGGGAAGATATGGAACGCCTTTGTTTTCATGGAATGGCCATGCTGTTGTCAGAAGATCGCTTAAAGCTCATCCCAGAGGAAACTATGGAGGTCATGGAGATGAATATGATGCATTTCTTAATATATTTGAAGGGGGTTCCCTTTTATATTGCAATATGTCTTTTGATGCACTCCTAAGTGTCAGAAAGCAACTTGAAGATTTAGGTTTCCCTTGCAAAGCTGTGAATGATGGTCTGTGGCTGCAGATGCTTCTAAGGCAGAGGGTACAAGAAATTGCTGCTGATACGTGCAAAGTTTGTTCTCTTATGAGTATGGCTTGCACCTGCCAGAAGCAATTTGCATTTTCACATGGAGCTAATACCACTGGATCTTACATGCAAGAACATATTCAGATCAATATGCCTGGGAATGTAGGAAATATATATGTCGCTGAATCTTCTCTAGGCGAAAGAAATGTCCCTTATAGACCTGGACGAGTGCATGATAGAGGTGCTATTGATGGGCTTGCCGGTATTGGCCGTGGAACTACATTTGTTCCAGCAGCTGCTTCACCTGCACGATTTGTCTTTTCTCGTGTACCATTTGGTGTTGGGAACAGAAACCACCCTCAGTCTGCAGCCAATGATGATTCAGAGACACGTGGTGACCACAATGGAGACCTATCTGGAGATGGGTTGACAGCTTTGGTTGGGCTAAGCCAAGGAGGGAGTAATGGAACAAATGTATCTACAGAGCTAACACAAAGGGGATATGAAATGGGCTTGCAAAGCAGCATGTCTGGAACTACTGCTGGAGGTGCAAGTACTGGTGGCATTCCCATGCAGATGTTAGAGACACCAGAACATACCATTGGTATAGAATGGGAGAATGCCAATAGTTCTTCTATATCATTGGATTTGAAGACACCTTTAAGCCATTTTCCCCCTTTTCGCTTTGGTGTACGCTTCGAGGATGTGCATAGGCTTGGTGATGGCCAGGTCAAGCATTCTCCAGAAGTTTTCTATGCTGGTTCTTTATGGAAGGTCAGTGTACAGGCTTTTAATGATGAAGACCCCCAGGGACGGCGTACCCTTGGGTTATTTCTTCACCGTCGGAAGGCAGAGATAACTGATATACATAAAAAGGTACATATGTATGTTGATTCACGTGAAAAGGTGACTGCACGCTATCAGTTGACTTGCCCATCCAAGAGGGAAGTGATGGTGTTTGGAAGCTTTAAACAAACGGGCACTCTTCTACCTAAAGCTCCTAAAGGATGGGGTTGGCGAACTGCTCTGCTATTTGATGAGCTTGCTGATCTTCTCCAAAATGGGGCCTTAAGGGTCATTGCTGTAGTGCAGCTTGTTTGA 2634 0.4415 MVMDDPQYPINPPSPYQHQHAPPIPKPPSQHSDNDRSTTELRALDCNLNSLCEHVQIEGFNSGSFSDIVVNAMGSTYHLHRLILSRSSYFRNMLHGPWKEASAPVVTLLVDDKNVNDEAIAMALAYLYGHHPKLNDDNAFRVLAAASFLDLQDLCAICTDFIISELWTSNFLAYQVFAENQDYGIHGERVRTACWGYLCQSGGMELKEVLPKLSSQTLHALLTSNDLWIPSEEKRFELALHTFLAKSAHCKVEHPAHGISGSESATGIHSDSDNTKGKSVTDSCNNKRLETDIAKMSLKSDPTDPSTPNLLVELADSVADLKNEVSDSNQQVQQASYVSSPNLNRGYPCDMEGPSLGNSLSGTDGRTSCYVEVPLGAGATGFGTAGVGIEGPSEEGSCYHLDNNSWLVRDQSRQCFSTNSCNGFTSSDWGRYGTPLFSWNGHAVVRRSLKAHPRGNYGGHGDEYDAFLNIFEGGSLLYCNMSFDALLSVRKQLEDLGFPCKAVNDGLWLQMLLRQRVQEIAADTCKVCSLMSMACTCQKQFAFSHGANTTGSYMQEHIQINMPGNVGNIYVAESSLGERNVPYRPGRVHDRGAIDGLAGIGRGTTFVPAAASPARFVFSRVPFGVGNRNHPQSAANDDSETRGDHNGDLSGDGLTALVGLSQGGSNGTNVSTELTQRGYEMGLQSSMSGTTAGGASTGGIPMQMLETPEHTIGIEWENANSSSISLDLKTPLSHFPPFRFGVRFEDVHRLGDGQVKHSPEVFYAGSLWKVSVQAFNDEDPQGRRTLGLFLHRRKAEITDIHKKVHMYVDSREKVTARYQLTCPSKREVMVFGSFKQTGTLLPKAPKGWGWRTALLFDELADLLQNGALRVIAVVQLV* 878
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04884 877 MobiDBLite consensus disorder prediction 1 37 - -
Rops2g04884 877 MobiDBLite consensus disorder prediction 627 651 - -
Rops2g04884 877 SUPERFAMILY POZ domain 60 164 IPR011333 -
Rops2g04884 877 ProSiteProfiles BTB domain profile. 66 136 IPR000210 GO:0005515
Rops2g04884 877 Pfam BTB/POZ domain 60 164 IPR000210 GO:0005515
Rops2g04884 877 MobiDBLite consensus disorder prediction 256 285 - -
Rops2g04884 877 Coils Coil 311 331 - -
Rops2g04884 877 SMART BTB_4 66 166 IPR000210 GO:0005515
Rops2g04884 877 Gene3D Potassium Channel Kv1.1; Chain A 33 199 IPR011333 -
Rops2g04884 877 MobiDBLite consensus disorder prediction 8 29 - -
Rops2g04884 877 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN 16 877 - -
Rops2g04884 877 MobiDBLite consensus disorder prediction 263 282 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Rops2g04884 BTB 6.6e-14 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04884 - - gmx:100806711 1509.58