Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04880 ATGGAGGATTCGTCAGGGCTAAAATGGAAGGACCGAGAGTTCGTTTTGGTATCAGTTTCCGACCTCTCTTCGGGTCCTTCTTCTGTTTCGCCGGCGATTGCTCGTTTCAGCTCCGACGGTCTCCAAATTAATCGAGAATCTCAGCAGATTCCCCTAAATGTTGATCTCCGAACTGTGCAGCTATTCAAATTGGGTCCTGTTCAATCGGTTTGCATGGTGGAAGGGTCTGATGCTGGTAAAAAGACATCATATTCCACGGGAGTGACTATCCAGTTTAGAAATGAGGAGGAAAGTGCGGCCTTCCATTGTGTAGTCCAACAATGGAAGAAGGAAGCAAATGTTCAAGGACGAAACTTACCAAATGGAACTTTAACTTGTAAAAGCAAATTTGATGAAAAGATAGAGCCTTCTTCTGCAAAAATGTATTTTCATTATTATGGACAACTTCTGCATCAGCAAAATATGTTGCAGGACTATGTGCGGACAGGAACCTATTATGCTGCTGTTATTGAGAACCGTGCTGATTTCATTGGCCGTGTAGTAGTTGATGTGGGTGCTGGTAGTGGTATCTTGTCATTATTTGCTGCTCAGGCTGGTGCAAAACATGTTTATGCTGTGGAAGCATCTGAAATGGCAGAGTATGCACAGAAACTTATAGCTGGGAACCCTACACTGGCTCAACGAATTACAGTGATCAATGGCAAAGTTGAGGATGTTGAATTGCCAGAGAAAGCAGATATTCTGATCTCTGAGCCCATGGGCACCTTGTTAGTTAATGAAAGAATGCTGGAGTCTTATGTCATTGCCAGAGATAGGTTTCTCACTCCTACAGGGAAAATGTTTCCTGCAGTGGGAAGGATTCACATGGCACCTTTCACTGATGAATATTTATTTATTGAAATTGCTAATAAGTCCTTATTCTGGCAGCAGCAAAACTATTATGGTGTAGATTTAACACCCTTGCATGGCACCGCATTTCAAGGATACTTTTCTCAGCCTGTGGTGGATGCTTTTGATCCAAGATTGTTAATAGCTCCCCCAACGTTCCATGGGATAGACTTCACCAAAATAAAGGAAGAAGAACTATATGAAATTGACATTCCTCTGAGATTCATAGCCTCTGTGGGTGCCAGAGTACATGGATTGGCATGTTGGTTTGATGTACTATTCAATGGAAGCACTGTGCAAAGGTGGCTTACCACTGCTCCTGGTTCACCGACTACCCATTGGTACCAGTTACGATGTGTTCTCTCTCAGCCAATTTATGTCATGGCAGGACAAGAAATTACTGGCAGGCTTCACTTGATTGCCCACAATGCACAGAGTTATACAATATATTTAACATTGTCAGCTAAAATGTGGGGTCCTGGTGCTGAACAAGGAGGGATTCTTCAAACATCGTCCTGTAAGCTTGATCTGAAAGAACCCTACTATAGGATGTCTCAACCACAAGCTTATGCATTAGCCCAAGATCAACAACCTCAACCACTTATACAGACACAGGATATACATATCCAATCTCAGGAATTGGATGAACCCGAGTTAATGCAACAGCCTTCGCCCAATTCATGTGCTCAGATTGATTCATTGATGCAGAATGTTTAA 1605 0.4268 MEDSSGLKWKDREFVLVSVSDLSSGPSSVSPAIARFSSDGLQINRESQQIPLNVDLRTVQLFKLGPVQSVCMVEGSDAGKKTSYSTGVTIQFRNEEESAAFHCVVQQWKKEANVQGRNLPNGTLTCKSKFDEKIEPSSAKMYFHYYGQLLHQQNMLQDYVRTGTYYAAVIENRADFIGRVVVDVGAGSGILSLFAAQAGAKHVYAVEASEMAEYAQKLIAGNPTLAQRITVINGKVEDVELPEKADILISEPMGTLLVNERMLESYVIARDRFLTPTGKMFPAVGRIHMAPFTDEYLFIEIANKSLFWQQQNYYGVDLTPLHGTAFQGYFSQPVVDAFDPRLLIAPPTFHGIDFTKIKEEELYEIDIPLRFIASVGARVHGLACWFDVLFNGSTVQRWLTTAPGSPTTHWYQLRCVLSQPIYVMAGQEITGRLHLIAHNAQSYTIYLTLSAKMWGPGAEQGGILQTSSCKLDLKEPYYRMSQPQAYALAQDQQPQPLIQTQDIHIQSQELDEPELMQQPSPNSCAQIDSLMQNV* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04880 534 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 135 450 IPR025799 GO:0016274|GO:0018216
Rops2g04880 534 CDD AdoMet_MTases 181 281 - -
Rops2g04880 534 FunFam Probable histone-arginine methyltransferase CARM1 284 492 - -
Rops2g04880 534 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 93 465 IPR025799 GO:0016274|GO:0018216
Rops2g04880 534 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 145 456 IPR029063 -
Rops2g04880 534 Gene3D Vaccinia Virus protein VP39 121 282 IPR029063 -
Rops2g04880 534 FunFam Probable histone-arginine methyltransferase CARM1 122 282 - -
Rops2g04880 534 Gene3D - 284 492 - -
Rops2g04880 534 Pfam Ribosomal protein L11 methyltransferase (PrmA) 178 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04880 Rops-Chr2 88077110 88086720 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04880 142 431 C2H2 Transcription Factor Family AT3G12270 33.016 1.06e-37 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04880 K05931 - gmx:100780736 939.873
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g04880 2 88077110 88086720 Rops11g02582 11 44150775 44151404 PCT