Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04877 ATGCTTAGTCCTGAAGGAGAACTTAAAATAAGTTTTGGCTATAAATGCAATAGTGATAGAAGTATTCCTTGTGAGATCCTCAATGGCTACAAAATCCTTCCTGAAGTTCGTAGAACAAGTAGTTTCTCTTGCTTGTCAGGCGCAGCCTTAAGTGCAAATGCTACACTAGCTAACACAAACATCTGCAATGGTAAGATCGGAGGAGAAATCCTTCCAAGTTGGGACTCTCCTAATTCATTTCGTAAAGTACCCTCTTCGCCAAGTCTTTCAAGGTTGGACAGATTATCATCTTCCCTCCCAAGTAGTTTGTCTTACCTAAGCTGTAGTCCTTCCACTCCAAGTGATATCCTTGAATACGACTCATCCATCAGTGATCCTTCCAGAAGTGAAGGTTTTCTTAATGCTAAGGAAATTCAAGTAGCAGGAGGAGCTGCTGGTGAAGACAGGGTTCAAGCAGTTTGTTCTGAAGAAAATGGATGGCTCTTTTGTGCAATTTATGATGGCTTTAATGGGAGAGATGCAGCTGACTTTCTGGCTGGTACCCTGTATGACACCATCATATCTTACTTGAATAAGTTAATTTGGGAATTGGAGCCAGGTTCCACCAAAACTTCTAATGATGTGGGTTTGGGTGGACCCCTTCAATATAAGTTGGATGATAGTCTTATTTGTCATGAAGATCAATCTCTATCAAGAACTAAGGAAAGAAATGATTTTAATCAAGGGTTTTTTGAAAAGGGTAGTCCATCTACTAAGTCAGAAGCATCATGTGAGTCATTTTCAAATGGGGTACTTGATAGCCTCCAACATGCTCTTAGTCAGGCTGAGAATGATTTCTTGTACATGGTTGAGCAGGAAATGGAGGAACGTCCAGATTTAGTTTCTATTGGATCTTGTGTTTTACTTTTGCTTCTTCATGGTAATGATTTGTATACACTTAATCTAGGTGACAGCAGAGCAGTATTGGCAACATGCAGTACAGGCGACAGAATAAATAAGAGTGAGGGACTCCAGGCTATACAGCTTACAGATAGTCATACTGTTGAAAATGAAACTGAAAGAGCTAGACTTCTAGCTGATCATCCTAATGATCCCAAGGTCATTGTTGCAGGAAAAGTGAAAGGTAAACTAATGGTTACTCGTGCATTTGGAGTTGGCTACTTGAAAAAGAAAAATCTGAATGATGCTTTGATGGGAATCCTTCGAGTTCGTGATCTTACAAGCCCACCATATATTTCCACTCAACCATCACTGAATGTCCATAAAATCTCAAACTCTGATCAATTTGTTATAGTAGGTAGTGATGGTTTATTTGACTTCTTCGGCAATGATGAGGCTGTAAAGCTTGTAGTGTCTTATATCTTGAGTAACCCTTTGGGTGATCCAGCAAAGTTTCTCATAGAGCAACTTGTAGCTAGAGCAGCTGATTCTGCAGGTTTCAGCATGGAAGAGTTGATGAATGTTCCGGCTGGGAGGAGAAGAAAGTACCATGATGACGTGACAGTAATTGTGATCATGCTTGGGATGAATCAGCGGACTTCAAAGGCTTCAACTTGCATCTAA 1563 0.4031 MLSPEGELKISFGYKCNSDRSIPCEILNGYKILPEVRRTSSFSCLSGAALSANATLANTNICNGKIGGEILPSWDSPNSFRKVPSSPSLSRLDRLSSSLPSSLSYLSCSPSTPSDILEYDSSISDPSRSEGFLNAKEIQVAGGAAGEDRVQAVCSEENGWLFCAIYDGFNGRDAADFLAGTLYDTIISYLNKLIWELEPGSTKTSNDVGLGGPLQYKLDDSLICHEDQSLSRTKERNDFNQGFFEKGSPSTKSEASCESFSNGVLDSLQHALSQAENDFLYMVEQEMEERPDLVSIGSCVLLLLLHGNDLYTLNLGDSRAVLATCSTGDRINKSEGLQAIQLTDSHTVENETERARLLADHPNDPKVIVAGKVKGKLMVTRAFGVGYLKKKNLNDALMGILRVRDLTSPPYISTQPSLNVHKISNSDQFVIVGSDGLFDFFGNDEAVKLVVSYILSNPLGDPAKFLIEQLVARAADSAGFSMEELMNVPAGRRRKYHDDVTVIVIMLGMNQRTSKASTCI* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04877 520 ProSiteProfiles PPM-type phosphatase domain profile. 132 507 IPR001932 -
Rops2g04877 520 Gene3D - 109 516 IPR036457 -
Rops2g04877 520 Pfam Protein phosphatase 2C 267 462 IPR001932 -
Rops2g04877 520 SUPERFAMILY PP2C-like 146 508 IPR036457 -
Rops2g04877 520 PANTHER PROTEIN PHOSPHATASE 2C 138 505 IPR015655 GO:0004722|GO:0006470
Rops2g04877 520 FunFam Probable protein phosphatase 2C 40 116 516 - -
Rops2g04877 520 SMART PP2C_4 131 505 IPR001932 -
Rops2g04877 520 CDD PP2Cc 145 505 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04877 Rops-Chr2 88037582 88042099 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04877 4 520 PP2C-type Phosphatase Gene Family AT3G16560 59.699 0.0 579
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04877 - - gmx:100808304 856.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g04877 2 88037582 88042099 Rops11g01561 11 23821018 23825031 PCT