Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04863 ATGTTTCATTTTCACCGCCTGAGAGCTCTTCTCTACCTCAACACTCTCTCCCAATTCTCACCACTAACCCCAAAATGTTACCTTTTTCTCAAGCCTCACCCATTGCCCCTCTCTTTCAACTTCTTCTCAACCACCACTTCAGATCAACAACAATCCTTCACCCTAACCTACCTCACCAAAAATTGTGGCTTTTCACCAGAAGCTGCTTTAAGAGCATCCAAACGGCTTCGTTTAGACACCACCCAGAAGCCCGATTCAGTTATCTCCTTCTTCAAAAACCACGGTTTCTCCATCTCCCAGATTCACAGCATCATTGGCAGGCTACCTGAGCTAATTGCATGCGACCCCATCAAAAGGGTCTTGCCAAAGTTTCAATTTTTAGCCTCCAAAGGTGCTTCTGCCACTGACATAGTAACCACAGTAACTAAAAGCCCAAGTTTTTTGTGTTCAAGCCTTGAGAGGCACCTAATACCTGCGTATGAATTGGTAAGGAGATTCTGTCCATCTGATGATAAAGCCATTGTTTGTGTTATTGCTTGTCCCTATTCCATTAGATATCCTCGTCTGGAACCAAATGTGAAATTGTTGCTTGATGTTGGAGTCACTCCCTCAAACATTTACCATTTGCTTCGAACTAGGCCTTCTATATTTTGCTCTGCTAACTTGGGAAGGGCCGTGGAGGAAGTAAAAGGATTGGGATTTGATCCTTCCCAGTTAAAATTTAGTGTTGCATTGCTGGCTAAGAAGGCAATCACTAAAACTCAATGGAATGCCAAAGTTGATGCCTTTAAGAGATGGGGTTGGTCTGAAGATGCAATTTTCCTTGCATTTAAGAAGCATCCTAACTTCATGCTGAGGTCTACGGATAAACTCAATGCAGTGATGAGTTTTTGGGTCCACAGGCTTGGTTGGGATGCTTCAGTGCTTCTGGCATCACCAGTACTTTTTGGATATAGTTTGGAGAAAAGGCTTATTCCAAGGGCTTCAGTTATCCAGTATCTTCTCTCCAAAGGTTTGATAAAGAAGGATGCTAGCTTAGTTACACCATTTGGTTTGTCTGATCAGTTGTTCCTGCAAAGGTTTGTGAACCGTTTTGAGGAGGAGGAAACATCTAAGCTACTAGGGCTTTGTCAGGGGGGGTGCTAG 1146 0.4346 MFHFHRLRALLYLNTLSQFSPLTPKCYLFLKPHPLPLSFNFFSTTTSDQQQSFTLTYLTKNCGFSPEAALRASKRLRLDTTQKPDSVISFFKNHGFSISQIHSIIGRLPELIACDPIKRVLPKFQFLASKGASATDIVTTVTKSPSFLCSSLERHLIPAYELVRRFCPSDDKAIVCVIACPYSIRYPRLEPNVKLLLDVGVTPSNIYHLLRTRPSIFCSANLGRAVEEVKGLGFDPSQLKFSVALLAKKAITKTQWNAKVDAFKRWGWSEDAIFLAFKKHPNFMLRSTDKLNAVMSFWVHRLGWDASVLLASPVLFGYSLEKRLIPRASVIQYLLSKGLIKKDASLVTPFGLSDQLFLQRFVNRFEEEETSKLLGLCQGGC* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04863 381 Gene3D Transcription termination factor 3, mitochondrial 65 184 IPR038538 -
Rops2g04863 381 Gene3D Transcription termination factor 3, mitochondrial 185 369 IPR038538 -
Rops2g04863 381 SMART mt_12 306 340 IPR003690 GO:0003690|GO:0006355
Rops2g04863 381 SMART mt_12 274 305 IPR003690 GO:0003690|GO:0006355
Rops2g04863 381 SMART mt_12 174 202 IPR003690 GO:0003690|GO:0006355
Rops2g04863 381 SMART mt_12 102 133 IPR003690 GO:0003690|GO:0006355
Rops2g04863 381 SMART mt_12 138 169 IPR003690 GO:0003690|GO:0006355
Rops2g04863 381 FunFam Mitochondrial transcription termination factor-like 152 369 - -
Rops2g04863 381 Pfam mTERF 88 292 IPR003690 GO:0003690|GO:0006355
Rops2g04863 381 Pfam mTERF 255 357 IPR003690 GO:0003690|GO:0006355
Rops2g04863 381 PANTHER CGI-12 PROTEIN-RELATED 50 366 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04863 Rops-Chr2 87862699 87864144 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Rops2g04863 mTERF 7.7e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04863 K15032 - gmx:102666622 352.829