Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04862 ATGTTTCAGTGTCACCGCCTTAGAGCTCTTCTCTACCTCAACTCTCTCTCCCAATCATCACCACCATCCCCTAAATGTTACCTTTTTCTCAAACCCCACCCATCACCACTGTCTTTCAACTTCTTCTCCACTACCACTTCAGATCAACAACGATCTTTCACCATATCCTACCTCACCAAAAATTGTGGCTTTCACCCAAAAGCTGCTTTAAAAGCATCCAAACGGGTTCATTTCGACACTGCCCAGAAGCCCGATTCAATTATCTCCTTCTTCAAAAGCCACGGTTTCTCCATTTCCCAGATACACAGCATCTTTGGCAGGGCACCCGAGCTACTTGCATGCGACCCCATCAAAAGGGTCTTGCCAAAGTTTCAATTTTTAGCCTCCAAAGGTGCTTCTGTCACCGACATAGTAACCACAGTAAATAAAAGCCCAAAGTTTTTGCGTATAAGCCTTGAGAGGCACCTAATACCTGCGTATGAATTGGTAAGGAGATTCTGTCCATCTGATGATAAAGCTATTGCTTGTGTAATTGCTTGCCCCAATTCCATTGGTGATCCTCGTGTGGAACCAAATGTTAAATTGTTGCTTGATATTGGAGTCACTCCCTCAAACATTTACCATTTACTTCGTACTAGGCCTTCTATACTTTGCTCTGCTAACTTTGAAAAGGTCGTGGAGGAAGTAAAAGGATTGGGATTTGATCCTTCTAAGTTAAATTTTAGTGTAGCTTTGCTGGCTAAGAAGGCAATTACTAAAACTCAATGGGATGCCAAATTTGATGCCTTTAAGAGATGGGGTTGGTCTGAAGATGAAAATTTTCTTGCATTTAAGAAGCATCCTAACTTTATGCTACGGTCCACGGATAAAATCAATGCAGTGATGAGTTTTTGGGTCAGCAAGCTTGGTTGGGATGCTTCAGTGCTTCTGGCATCACCAATACTTTTTGGATATAGTTTGGAGAAAAGGCTTATTCCAAGGGCTTCTGTTGTCAAATATCTTCTCTCCAAAGGTTTGATAAAGAAGGATGCTAACTTAGTTACACCATTCTGTGTGTCTGATCAGTTGTTCCTGCAAAAGTTTGTGAATCGTTTTGAGGAGAAGGAAACATCTAAGCTACTAAGGCTGTATCAAGGGGGATGCTAA 1146 0.418 MFQCHRLRALLYLNSLSQSSPPSPKCYLFLKPHPSPLSFNFFSTTTSDQQRSFTISYLTKNCGFHPKAALKASKRVHFDTAQKPDSIISFFKSHGFSISQIHSIFGRAPELLACDPIKRVLPKFQFLASKGASVTDIVTTVNKSPKFLRISLERHLIPAYELVRRFCPSDDKAIACVIACPNSIGDPRVEPNVKLLLDIGVTPSNIYHLLRTRPSILCSANFEKVVEEVKGLGFDPSKLNFSVALLAKKAITKTQWDAKFDAFKRWGWSEDENFLAFKKHPNFMLRSTDKINAVMSFWVSKLGWDASVLLASPILFGYSLEKRLIPRASVVKYLLSKGLIKKDANLVTPFCVSDQLFLQKFVNRFEEKETSKLLRLYQGGC* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04862 381 PANTHER CGI-12 PROTEIN-RELATED 50 365 IPR003690 GO:0003690|GO:0006355
Rops2g04862 381 SMART mt_12 174 202 IPR003690 GO:0003690|GO:0006355
Rops2g04862 381 SMART mt_12 274 305 IPR003690 GO:0003690|GO:0006355
Rops2g04862 381 SMART mt_12 306 340 IPR003690 GO:0003690|GO:0006355
Rops2g04862 381 SMART mt_12 207 235 IPR003690 GO:0003690|GO:0006355
Rops2g04862 381 SMART mt_12 102 133 IPR003690 GO:0003690|GO:0006355
Rops2g04862 381 Pfam mTERF 257 357 IPR003690 GO:0003690|GO:0006355
Rops2g04862 381 Pfam mTERF 88 238 IPR003690 GO:0003690|GO:0006355
Rops2g04862 381 Gene3D Transcription termination factor 3, mitochondrial 186 369 IPR038538 -
Rops2g04862 381 Gene3D Transcription termination factor 3, mitochondrial 63 185 IPR038538 -
Rops2g04862 381 FunFam Mitochondrial transcription termination factor-like 152 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04862 Rops-Chr2 87847683 87854862 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Rops2g04862 mTERF 1.7e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04862 K15032 - gmx:102666739 355.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g04862 2 87847683 87854862 Rops2g04862 2 87847683 87854862 ECH
Rops2g04862 2 87847683 87854862 Rops11g01572 11 23984894 23986072 PCT