Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04861 ATGTTTCATTTTCACCGCCTGAGAGCTCTTCTCTACCTCAACACTCTCTCCCAATTCTCACCACCATCCCCAAAATGTTACCCTTTTCTCAAACCCCACCCATTACCACTCTCTTTCAACTTCTTCTCAACCACCACTTCAGATCAACAACAATCTTTCACCATATCCTACCTTACAAAAAATTGTGGCTTGTCACCAAAAGCTGCTTTAAAAGCATCCAAACGGGTTCGTTTCGACACTGCCCATAAGCCCGATTCAGTTATCTCCTTCTTCAAAAACCACGGTTTCTCCATTTCCCAGATTCACAGCATCATTGGCAGGGCACCTGAGCTACTTGCATGCGATCCCATCAAAAGGGTCTTGCCAAAGTTTCAATTTTTAGCCTCCAAAGGTGCTTCAGCAGCTGACATAGTAACCACAGTAACTAAAAGCCCAAGTGTTTTGCGTATAAGCCTTGAGAGGCACCTAACACCTGCATATGAATTGGTAAGGAGATTCTGTCCATCTGATGATAAAGCTATTGCTTGTGTAATTGCTTATCCCTATTCCATTGCTCGTTTGGAACCAAATGTTAAGTTGTTGCTTGATGTCGGAGTCACTCCCTCAAATATTTACCATTTGCTTCGTACTAGGCCTTCTATACTTTGTTCTGCTAATTTCGATAAGGCCGTTGAGGAAGTAAAGGGAATGGGGTTTGATCCTTCTAAATCAATTTTTAGTGTAGCATTGCTTGCCAAAAAGGCAATGACTAAATCCCAATGGGATGCCAAATTTAAGAGATGGGGTTGGTCTGAAGATGCAATTTTCCTTGCATTTAAGAAGCATCCTAACTTTATGCTAAGGTCTCCGGATAAACTCAATGCAGTGATGAGTTTTTGGGTGAACCGGCTTGGTTGGGATGCTTCAATGCTTCTGGCATCACCAGTACTTTTTGGATTTAGTTTGGAGAAAAGGCTTATTCCAAGGGCTTCAGTTGTCCAATATCTTCTCTCCAAAGGTTTGATAAAGAAGGATACTAACTTGATTGCACCATTTCGTTTGTCTGATCAGTTGTTCTTGCAAAAGTTCGTGAAATGTTTTGAGGAGGAGGAAACATCTAAGCTACTAAGGCTTTATCAGGGGGGATACTAG 1131 0.4182 MFHFHRLRALLYLNTLSQFSPPSPKCYPFLKPHPLPLSFNFFSTTTSDQQQSFTISYLTKNCGLSPKAALKASKRVRFDTAHKPDSVISFFKNHGFSISQIHSIIGRAPELLACDPIKRVLPKFQFLASKGASAADIVTTVTKSPSVLRISLERHLTPAYELVRRFCPSDDKAIACVIAYPYSIARLEPNVKLLLDVGVTPSNIYHLLRTRPSILCSANFDKAVEEVKGMGFDPSKSIFSVALLAKKAMTKSQWDAKFKRWGWSEDAIFLAFKKHPNFMLRSPDKLNAVMSFWVNRLGWDASMLLASPVLFGFSLEKRLIPRASVVQYLLSKGLIKKDTNLIAPFRLSDQLFLQKFVKCFEEEETSKLLRLYQGGY* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04861 376 Gene3D Transcription termination factor 3, mitochondrial 51 183 IPR038538 -
Rops2g04861 376 Gene3D Transcription termination factor 3, mitochondrial 184 366 IPR038538 -
Rops2g04861 376 SMART mt_12 138 169 IPR003690 GO:0003690|GO:0006355
Rops2g04861 376 SMART mt_12 102 133 IPR003690 GO:0003690|GO:0006355
Rops2g04861 376 SMART mt_12 301 335 IPR003690 GO:0003690|GO:0006355
Rops2g04861 376 SMART mt_12 205 233 IPR003690 GO:0003690|GO:0006355
Rops2g04861 376 SMART mt_12 269 300 IPR003690 GO:0003690|GO:0006355
Rops2g04861 376 FunFam Mitochondrial transcription termination factor-like 152 364 - -
Rops2g04861 376 PANTHER CGI-12 PROTEIN-RELATED 50 361 IPR003690 GO:0003690|GO:0006355
Rops2g04861 376 Pfam mTERF 88 233 IPR003690 GO:0003690|GO:0006355
Rops2g04861 376 Pfam mTERF 257 352 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04861 Rops-Chr2 87844295 87846136 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Rops2g04861 mTERF 5e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04861 K15032 - gmx:102666622 347.436