Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04860 ATGCGAATGCGAATGCTGATGCTGATGTTGAAATTCTACACCCGCAATGCACTTGTTTGCGCCACAACAAGAACATTGCCAACCCCACAATGTTCTCCTCCTCTTCTGAAACTCCAACTCCAACCCTTCTCACTCAAATTCTCCTCTCACCCTCACTCTTCTTCTACCTTGTCCTACCTCATCAACAATTTTGGCTTCTCCCCAGAAACCGCTTTCAAAGTGTCCGACAAGCTTCATCTCCACAACCACCAAAAGCTCGATTCAGTTCTCGCCTTCTTCAGAACCCACGGCTTCTCTGACTCTCAAATACGTGATATCATCAGAAGGGAACTATGGCTCCTCTCCTGCAACCCCCACAAGGTACTCTTGCCCAAGTTTCAATTTTTACTCTCTAAAGGTGCTCCTACCTCTGATATTGTTCACATGGTGAGTGCCAACCCTAGACTCCTGCATAGAAGCTTGCACAATCATATAATACCTGCATATGAATTGGTAAGAGGGTTCTTCCAATCTGACCAGCGAACCATTACTTGTATGAATCATAATGCTTCTTTTCTTTCTGATGGTCGCCTGGCACCTAACGTCAAATTGTTGCTGGATAATGGAGTCACTCACTCAAGCATTGCTAGGTTGTTTCACACACGGCCTAGAATACTTTGCTCTTTTAACCTGCTGAAGATTGTTGAGGAATTGAAGGAACTGGGTTTCAAGTCTTCAACCTCAACTTTTAGTGTGGCATTGCTTGCCAAGACCACTGTGAGCAAAACCAGGTGGACTGAGAAAAGTGAAATCTTTAAGAGGTGGGGTTGGTCTCAAGAACACATTCTTGAAGCATTTAAGAAGCAGCCTTACTGTATGTTGTCATCCACTGATAAAATTAATGCAGTGATGAGTTTTTGGGTTAATGAATTAGGTTTTAATTCTTTGCACCTTGTCAAAGCTCCAGGAATTTTTTCATATAGTCTCGAGAAGAGGATTGTTCCAAGGGCATCAGTTGTGCAGTTTCTTATCTCAAAAGGTCTGCGGGACAAGGATGTAGGTGTAAATCAACCATTTCTTATTACTGAGAAGTTGTTCCTGGAAAAGTTTGTGAAACGTTTTAAGGAGGATTCTTCTCATCTGTTAAAGCTGTATGAGGAAAAAATGAATCCTGCTAATAGCAGGGAGAAAGCCTTCACTGAGTGTGTGACTTCTTGA 1197 0.4261 MRMRMLMLMLKFYTRNALVCATTRTLPTPQCSPPLLKLQLQPFSLKFSSHPHSSSTLSYLINNFGFSPETAFKVSDKLHLHNHQKLDSVLAFFRTHGFSDSQIRDIIRRELWLLSCNPHKVLLPKFQFLLSKGAPTSDIVHMVSANPRLLHRSLHNHIIPAYELVRGFFQSDQRTITCMNHNASFLSDGRLAPNVKLLLDNGVTHSSIARLFHTRPRILCSFNLLKIVEELKELGFKSSTSTFSVALLAKTTVSKTRWTEKSEIFKRWGWSQEHILEAFKKQPYCMLSSTDKINAVMSFWVNELGFNSLHLVKAPGIFSYSLEKRIVPRASVVQFLISKGLRDKDVGVNQPFLITEKLFLEKFVKRFKEDSSHLLKLYEEKMNPANSREKAFTECVTS* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04860 398 Gene3D Transcription termination factor 3, mitochondrial 71 184 IPR038538 -
Rops2g04860 398 Gene3D Transcription termination factor 3, mitochondrial 185 376 IPR038538 -
Rops2g04860 398 PANTHER CGI-12 PROTEIN-RELATED 49 368 IPR003690 GO:0003690|GO:0006355
Rops2g04860 398 FunFam Mitochondrial transcription termination factor-like 154 371 - -
Rops2g04860 398 Pfam mTERF 90 238 IPR003690 GO:0003690|GO:0006355
Rops2g04860 398 Pfam mTERF 253 350 IPR003690 GO:0003690|GO:0006355
Rops2g04860 398 SMART mt_12 276 307 IPR003690 GO:0003690|GO:0006355
Rops2g04860 398 SMART mt_12 309 342 IPR003690 GO:0003690|GO:0006355
Rops2g04860 398 SMART mt_12 209 237 IPR003690 GO:0003690|GO:0006355
Rops2g04860 398 SMART mt_12 140 171 IPR003690 GO:0003690|GO:0006355
Rops2g04860 398 SMART mt_12 174 204 IPR003690 GO:0003690|GO:0006355
Rops2g04860 398 SMART mt_12 104 135 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04860 Rops-Chr2 87839160 87840356 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Rops2g04860 mTERF 1.1e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04860 K15032 - gmx:102667698 420.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g04860 2 87839160 87840356 Rops2g04860 2 87839160 87840356 ECH